| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4183 |
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| Symbol | |
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| ID | 3680986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5235601 |
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| End bp | 5238435 |
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| Gene Length | 2835 bp |
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| Protein Length | 944 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637719530 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_324677 |
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| Protein GI | 75910381 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000166941 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTTAGAT TTAAGGAATT TTTGTGGAAA CAGCGCCAGA AATTTAGGTA TGGAATTTTG
GCTTTTGTGA TGGCTTTACT TTGTATATTT GTTTCGCCTG TGGTGGCTCG TGATAGGGGA
AGTCCAGGGT TGACTGCATC TGTAGTTGCT TCTGACTTTT CACGGGATCT GGAAAACCCC
TCTCCAAACC TCTCACGCCA GTTGCTTCAA GTCGGCAAAG CCGCCCAACG CACTGGCTCC
CCTGCAAGGA GAGAGGCTTT AAAATTTCCC CCCTCCCTAG TAGGGAAGGG GGTTAGGGGG
TTAGGTTTCG CGTTAGCTTT TCCACATAAC GTGAAAAGTC AGGTAGTTGC TTCTGTTCCT
CAAGAGGAAG AAGCTAAAAA TCTTTATACA GCAGGGCGAT TTGCAGAAGC AGTACAGCTA
TTACAACAAG TTTTGCCAGC TTACCAAACA AGTGGCGATA CGGTGGCACA GGCGGTAATT
TTGAGTAATT TGGCGCTGAA TTTGCACCAA TTAGGACGCA TCGGTGAAGC AACTGAGGCA
ATTGAAAAGG CGATCGCTAT TTTACAGACA AGTCCCAATT CACCACAACG CCTGTCAATT
TGGGCGCAAG TGTGGGATGT CAAAGGTAGT TTGGAACTAG CCCAGGGTAA GGCGGAAGCT
GCTTTGTCTG CTTGGGAAAA GTCTGCATTG CTCTATCAAC AATTAAAAGA CCACAATAAA
GCTACCCTCG CCCAAGTTAA TCAAGCCCAG GCTTTGCAGA CTTTGGGACT CTATCGCCGA
GAAATTACTC TCCTCCAGAA TTTGACAACA TCTCTGGCAA AACAACCAGA CTCCCTCTCT
AAGGCTGCTA GTTTCCGTAA CCTGGGTGAG GCTCTTATAC TTGCAGGTGA TCTTAAACAG
GCAGAAGTAA ATTTACAAAC TAGTCTGAAG ATTGCTCAAC AACTACAATC ACCAGAAGCC
ATTGCCTCAG CTTACCTGAG TTTAGGTAAT CTCGCTTATC TTCCCGGTAA CAGCACACAG
CAAAAAAACA TCGCTCTCAA TTATTACCAG CAAGCATCGG TTTTATCAAC TACTGCAACT
ACAAAAATCT CGTCCCAATT GAATCGGTTA CGTCTGTTGA TTGATTTGGA ACAATGGTCA
AACGCCCAAG CATTATATTC CGAAATTCAA AGTCAAATTG CTAACTTACC TTTGGGACGT
TCTGCTATTT ACGCTCAGGT AAATTTGGCT CAAAGCCTTC TGAAATTAAC AAAAAAATTC
CCTAACCCCA GCCCCGAAAC AATTGGTAAA ATCTTGGCTG TGGCACGTCA GCAAGCAGAG
CAATTACAAG ATGTGCGAGC CGGGTCTTTT GTCTTAGGTA ATCTTGGACA CTTGTATGAA
CTATCTCACC AATGGTCTAT AGCCCAAGAT TTGACCAGAA AGGCGCTGAA TTTGTCCCAG
TCGATTCACG CACCAGATAT TGACTATCGT TGGCAGTGGC AACTGGGGCG GGTTCTCTGC
CAAGGTAAAC GCCAGTGTGA ACAGCAGGGT GATATGCAGG GAGCCATTGC CGCCTATACA
GAAGCATTTA ATACTTTACA AAATATCCGT ACGGATTTAA TTGCCACAAA TAAAAATGTG
CAGTTTTCTT TCCGGGAAAC AGTAGAGCCT GTATATCGCC GTTTAGTAGA TTTGTTACTC
CAATCCTCAG CACCGAGTCA GGACAACCTA ATACAAGCTC GCAACGTGAT TGAAGCATTA
CAAGTGGCAA AATTGCAAAA CTATTTGCAA CAAACTTGTC AAGATACTCG ATTAGAACTT
GATCAGGTGA TTGATTCTAA AGACCAAACA TCGGCAATTA TCTATGCAAT TATTTTGGAT
GACCGTGTAG AAGTTATCCT CAAGCGACCG AATCAAAAAC TTGATCATTA TGCTACCAAG
CCCCAAGAGA AAATTGAAGA GGTTGTAAAG CGTCTGTATC AAAATCTGCA AGAAGTGGGT
AGTTATGAAG AAGTGCAACA GGATGGTCAA CAAGTTTATA GCTGGTTGAT TCAACCAATA
GAAAAAAAGC TAAAGGAAAG TAAAATTAAG AACTTGGTTT TTGTCTTGGA TGGCTTTTTA
CGTAAAATTC CGATGGCTAG CCTTTATGAT GGTCAGCAAT ATCTAGTAGA AAAATATGCT
GTCTCCTTAG CTTTGGGGTT ACAAGTCCGT GAACCAAAGC CATTAAACAG GTCAAAAATG
CAGGTTTTAG CCGCCAGCTT GACTGAACCA CCTAATAAAC CAGGATTTTC CGGCTTTTCT
CGATTAGCAA ATGTTAATCA AGAAGTGAGG GAAATTAAAA ATACAGGAAT AGCGGTTCAT
TGGATTACTG ACAAAGAATT TACCACCAAA AACTTTAACC AAAAACTGAA CACCTCTAAT
TTTGATGTCA TCCACTTAGC AACCCACGGT CTATTTAGTG CAGATAGAGA AAATACTTTT
GTGGTGACAG CAGATGGAAA GTTAAAGATA GATGATTTTG ATCAATTGTT TATTGACCAA
CAGCAAAACA GCACTCATAA AATTGAACTA CTGATTCTGA GCGCCTGTCA GACAGCTACG
GGTAACGACC AAGCAGTAAT GGGGATTGCG GGAGCTACAG TCCAAGCAGG TGCTAGTAGT
GCGATCGCCA GTTTGTGGGA TCTAGACGAT GAAGCTAGCG TTCCATTCAT TAAGGAATTT
TATCAACATC TAGGACAACC AAACATTAGC AGAGCCGAAG CACTGCGTTT AGCACAGCAA
GCTCTACTCA AAAACCCAAA ATACGATCAT CCTCGTTATT GGGCCCCCTA TGTCTTAATT
GGTAGTTGGC TTTGA
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| Protein sequence | MVRFKEFLWK QRQKFRYGIL AFVMALLCIF VSPVVARDRG SPGLTASVVA SDFSRDLENP
SPNLSRQLLQ VGKAAQRTGS PARREALKFP PSLVGKGVRG LGFALAFPHN VKSQVVASVP
QEEEAKNLYT AGRFAEAVQL LQQVLPAYQT SGDTVAQAVI LSNLALNLHQ LGRIGEATEA
IEKAIAILQT SPNSPQRLSI WAQVWDVKGS LELAQGKAEA ALSAWEKSAL LYQQLKDHNK
ATLAQVNQAQ ALQTLGLYRR EITLLQNLTT SLAKQPDSLS KAASFRNLGE ALILAGDLKQ
AEVNLQTSLK IAQQLQSPEA IASAYLSLGN LAYLPGNSTQ QKNIALNYYQ QASVLSTTAT
TKISSQLNRL RLLIDLEQWS NAQALYSEIQ SQIANLPLGR SAIYAQVNLA QSLLKLTKKF
PNPSPETIGK ILAVARQQAE QLQDVRAGSF VLGNLGHLYE LSHQWSIAQD LTRKALNLSQ
SIHAPDIDYR WQWQLGRVLC QGKRQCEQQG DMQGAIAAYT EAFNTLQNIR TDLIATNKNV
QFSFRETVEP VYRRLVDLLL QSSAPSQDNL IQARNVIEAL QVAKLQNYLQ QTCQDTRLEL
DQVIDSKDQT SAIIYAIILD DRVEVILKRP NQKLDHYATK PQEKIEEVVK RLYQNLQEVG
SYEEVQQDGQ QVYSWLIQPI EKKLKESKIK NLVFVLDGFL RKIPMASLYD GQQYLVEKYA
VSLALGLQVR EPKPLNRSKM QVLAASLTEP PNKPGFSGFS RLANVNQEVR EIKNTGIAVH
WITDKEFTTK NFNQKLNTSN FDVIHLATHG LFSADRENTF VVTADGKLKI DDFDQLFIDQ
QQNSTHKIEL LILSACQTAT GNDQAVMGIA GATVQAGASS AIASLWDLDD EASVPFIKEF
YQHLGQPNIS RAEALRLAQQ ALLKNPKYDH PRYWAPYVLI GSWL
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