Gene Ava_4177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4177 
Symbol 
ID3681038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5226684 
End bp5226956 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content42% 
IMG OID637719524 
Producthypothetical protein 
Protein accessionYP_324671 
Protein GI75910375 
COG category[L] Replication, recombination and repair 
COG ID[COG1343] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.344603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000136631 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTATTTAG TAATTTCCTA CGATGTACCA GAAGATAAAC GCCGTACTAA AATTCACAAG 
GTTCTTAAAT CTTACGGACA GTGGATGCAG TATTCCGTTT TTGAATGTGA CCTGACACCT
ACTCAGTATG CTAAACTGCG ATCGCGCCTA GCCAAACTCA TCAAACCAGA CCAAGACAGC
ATCCGTTTTT ATCACCTCTG TGCTTGCTGT CAAGGAAAAG TTGAGCGCAT CGGCGGCGAA
ATGCCAATAG ACACTACCGT ATTTTTTGCT TAA
 
Protein sequence
MYLVISYDVP EDKRRTKIHK VLKSYGQWMQ YSVFECDLTP TQYAKLRSRL AKLIKPDQDS 
IRFYHLCACC QGKVERIGGE MPIDTTVFFA