| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4163 |
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| Symbol | |
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| ID | 3681103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5211297 |
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| End bp | 5212415 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637719510 |
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| Product | binding-protein dependent transport system inner membrane protein |
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| Protein accession | YP_324657 |
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| Protein GI | 75910361 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0546516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000167593 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAATTGGT GGCAAAGACT TCAGAAAAAT CCTTTAGCGC AATTTGGGGC TATTTTACTT
TTAATATTTT ATTTGGCGGT GATTGCGGCT GATTTTATCG CTCCATACGA CCCTTACACT
TCTCAACCGA ATGGTTCGCT ATTACCGCCA ACTAAGATTT ATTGGGTTTC AAAAACATCA
GGTAAGTTTA TCGGCCCCCA CGTTTATCCC ACAACACAAG GTAATACAGA CTTAGAAACA
GGCGATCGCC AACTCATTGT AGACGATAAA AAGCCCTCAC CTGTGCGTTT CTTTGTCTCT
GGGCCAGAAT ACCGACTGTT ACAGCTAAGT TTACCCCTAC CCCCCAAGTG GGAAGAAACC
ACAATTATCC CCGGTATCCC CTTAAATTGG CATTTATTCG GTGCAGATAA TGGGGCAAAA
CTCAACATCT TAGGTACGGA CGAACAAGGC CGCGACCAAT TTAGCCGCCT CCTACATGGT
GGACGCATTA GTATGTTTAT CGGCATTATT GGGGTGGTAA TTACTTTTCC CCTCGGTTTG
CTAATAGGGG GAATTTCCGG CTATTTCGGT GGTTGGACGG ACAGCATTAT TATGCGGATT
GCAGAAGTGC TGATGACTTT CCCCAGTATT TATCTGTTAG TTACCTTGGG GGCAGTTTTA
CCGGCTGGTT TAACTAGCAG TCAGCGATTT TTACTCATAG TTTTGATCAC CTCTGTAATT
AGCTGGGCTG GGTTAGCCAG GGTAATTCGT GGACAAGTGC TGTCAATCAA AGAACGAGAA
TTTGTCCAAG CCGCCAGGGC TATGGGTGGT AAGCCAATAT ATATTATTCT GCGTCATGTT
CTGCCGCAAA CTGCTACTTA TGTAATTATC TCTGCTACTT TGGCGGTTCC TAGCTTTATC
GGTTCAGAAG CAATACTCAG TCTCATCGGT TTAGGCATCC AACAACCAGA CCCATCTTGG
GGTAATATGC TATCTCTAGC TAGCAATGCT TCCATATTAG TGCTGCAACC TTGGTTAATT
TGGCCGCCAG CCGTGTTAAT TATTTTGACA GTTTTAGCTT TTAATTTACT CGGTGATGGC
CTTAGGGATG CCCTTGATCC TCGGAGTTTA CGCCGCTAG
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| Protein sequence | MNWWQRLQKN PLAQFGAILL LIFYLAVIAA DFIAPYDPYT SQPNGSLLPP TKIYWVSKTS
GKFIGPHVYP TTQGNTDLET GDRQLIVDDK KPSPVRFFVS GPEYRLLQLS LPLPPKWEET
TIIPGIPLNW HLFGADNGAK LNILGTDEQG RDQFSRLLHG GRISMFIGII GVVITFPLGL
LIGGISGYFG GWTDSIIMRI AEVLMTFPSI YLLVTLGAVL PAGLTSSQRF LLIVLITSVI
SWAGLARVIR GQVLSIKERE FVQAARAMGG KPIYIILRHV LPQTATYVII SATLAVPSFI
GSEAILSLIG LGIQQPDPSW GNMLSLASNA SILVLQPWLI WPPAVLIILT VLAFNLLGDG
LRDALDPRSL RR
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