| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4159 |
|---|
| Symbol | |
|---|
| ID | 3681098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 5187009 |
|---|
| End bp | 5187947 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637719505 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_324653 |
|---|
| Protein GI | 75910357 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.606024 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGCT CTCTAGCAGT TTATTTGACT ACATTTAGCC TCTCACTGAC AATTGCTCCC
ACGGTGCAAG CTGCTTCCTT GAGTGCTTTG CCTCCTAACC CCATTGATGT CCCGAATGCA
CTGGCCACAA ATGCCTTCGG AATTAATAAT TATCATCACG TTGTCGGTAG TTTTGCTGAT
GAAACGACTG TTCGTAGTTT TCTCTTAAAC GATAAAAAAT TCAGTAATAT AGAAGTTCCC
AATGCCATCA GCACTACTGC CTTTGACATC AACGATTCCG GTCAAATTGT CGGATTATTC
AGCGATGGTA CGAGAAATTC GGGTTTTTTA TTTGATGGCA GTAATTTGAC GACGATTGAT
GTACCTGATG CGATTGTTAC TACAGTATTT GGCATTAACA ACTTTGGTCA CATTGTCGGT
TCTTATGTTG ATAGTAGTGG TGTGAGTCGA GGTTTCCTGC TCAATGGCGG TAATTTCACT
ACCATTAATG CTCCTGATGC TCTAGTAACT TTTGTTACCG ATATTAATGA TGCGGGGAAA
ATGGTCGGCT TCTTCGCAGA TTCCACAGGC TTAGTAAGCG GTTTTCTGCT AGATGGGGCT
AAATTCACCA CTATTCAGGC TCCTGGGGCA TTTTATACAA CAGTATTCGG GATTAACAAC
CAAGACACAA TAGTGGGTAA TTTCGCCAAT GATATAGGAA ATCAGGCATT TTACGCATCT
GGTAAATCAT TTATACCGAT TAGTATAGCT GATGCAGTTT CTATCTCAGC TTTCGACATT
AGCGATCGCA ATCGTGTTGT TGGTAGCTAC TTAGATATCA ACAGCATCTC TCACGGTTTT
AGCGTCCAAA TTCCTGAACG TTCCTCAACA TTAGGACTAC TGTGCATCAG TGTCTTAGTT
TTATTCAAAA TCGGTAACAG AAAATCGGTT ACTTCATAA
|
|---|
| Protein sequence | MQRSLAVYLT TFSLSLTIAP TVQAASLSAL PPNPIDVPNA LATNAFGINN YHHVVGSFAD
ETTVRSFLLN DKKFSNIEVP NAISTTAFDI NDSGQIVGLF SDGTRNSGFL FDGSNLTTID
VPDAIVTTVF GINNFGHIVG SYVDSSGVSR GFLLNGGNFT TINAPDALVT FVTDINDAGK
MVGFFADSTG LVSGFLLDGA KFTTIQAPGA FYTTVFGINN QDTIVGNFAN DIGNQAFYAS
GKSFIPISIA DAVSISAFDI SDRNRVVGSY LDINSISHGF SVQIPERSST LGLLCISVLV
LFKIGNRKSV TS
|
|---|
| |