Gene Ava_4151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4151 
Symbol 
ID3681090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5177752 
End bp5178579 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content46% 
IMG OID637719497 
ProductABC transporter-like 
Protein accessionYP_324645 
Protein GI75910349 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000107642 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.126355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCAAAAT CACTTGCCAG TAGCCCTAAC GCAGTGATTT TAGAAACCCA AGGACTGACG 
CGTTACTTTG GTAAAGCGGT TGCTGTCAAA GATTTAAGTA TCACAGTCCA ACAAGGTGAG
GTCTTTGGCT TACTTGGCCC TAACGGCGCA GGTAAAAGTA CAGCAATGAA GATGTTGACT
ACTCTATTGC CCCTAAGTGC AGGGAGAGCA ACTATAGCTG GTTATGACGT AACTCACCAG
GCGGCGGCTG TTAGACGGCT ATTTGGCTAT GTACCTCAAG CCCTTTCTGC TGATGGTAGT
CTCACAGGTT ACGAAAACCT CTTAATTTTT GCCAAGCTAT ACGATATTCC TGTCAAGCAC
AGGCAAAGGC GTATTCGGGA AGTGCTGGAT TTCATGGGTT TGCAAGCCGC AGCCCATCGT
TTAGTACGTA ACTACTCCGG TGGCATGATT CGCAAGCTAG AAATTGCCCA ATCTATCATG
CACCAACCCA AGATTTTGTT TCTTGATGAA CCGACTGTAG GACTAGATCC CATAGCCCGC
ACTCAGGTAT GGCAACTTGT GCAACAACTG CGAGCAGATT ACGGCACAAC CATATTTTTA
ACCACCCACT TTTTAGAAGA AGCTGATAGT CTGTGTAGCC GAGTGACGAT TATGCAGCAA
GGTCAAGTTG TGATCACAGG GGAACCCAGT GATTTAAAAG CTTCTTTAGG TAAGCCCAAT
GCAACCTTAG ATGATGTCTT TATTCATTAC ACAGGGGATC AACTAACATC AGGAGTGAAC
TATCGTGATA CAGCCAGAAC CAGACGTACA TCTCAACGGT TGGGTTAA
 
Protein sequence
MSKSLASSPN AVILETQGLT RYFGKAVAVK DLSITVQQGE VFGLLGPNGA GKSTAMKMLT 
TLLPLSAGRA TIAGYDVTHQ AAAVRRLFGY VPQALSADGS LTGYENLLIF AKLYDIPVKH
RQRRIREVLD FMGLQAAAHR LVRNYSGGMI RKLEIAQSIM HQPKILFLDE PTVGLDPIAR
TQVWQLVQQL RADYGTTIFL TTHFLEEADS LCSRVTIMQQ GQVVITGEPS DLKASLGKPN
ATLDDVFIHY TGDQLTSGVN YRDTARTRRT SQRLG