| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4149 |
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| Symbol | |
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| ID | 3681088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5175056 |
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| End bp | 5176831 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637719495 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_324643 |
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| Protein GI | 75910347 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0015025 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.169582 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCATG ATCTTTTGGG TAGCATCCGG ACAAAATTGA TCGCCTCGTT TCTCGTTGTT
GCTTTGATTC CGTTACTGTT ATTGGCATCT ATTAACAAAC AGACAACGGA AACAGCATTA
ACTGACAACG CTCGGCAAGC TTTATCTGCT GCGGCTAACC AAACCAGTAA CAGAATAGAT
GCTTTTATTG ATAGAAATCT TAATGCTGTG CGCGTAGAGG CGCTTTTACC AGGCTTGGCA
GGCTACCTCA GCCTAACTCC AAAAGCGCGA GATGATAGCC CCGAAATGCA ATTGGCAACG
GAAACATTAA ATCGGCTCAG TCGCAAAGAT ATGGTTCATA TTATCTCCTA TGGGTTGCTC
GACTTAAAAG GGAAGAATGT ATTGGATACA TATACATATA CATCAGACAT TAGCGAAGAT
GAATCAGATC AAGATTATTT TCAAAAACCA CTGCAAACTG GATTATCCTT TGCTTCTAGT
ATGAAGCGAT CGCCGATAAT TCCTGAGCTT ATTACTATCT TTTTTAGCAG TCCCGTTCGT
AATGCCCAAG GAGATATATT AGGTGTCTTG CGTGTTTCAT ACAATGCTAC TGTGATTCAG
CAGTTAGTAA ATAGAGAAAC TGAACTGGCT GGAGCTAAAT CCTTTGCTAT TCTTTTAGAT
GAAAATCATA TTTATCTGGC ACATAGTCAT GCACCGCAAC TACTTTTTAA ATCAATTGTG
CCTCTACCTT TCGATATTAT AACTCAACTA CAAAGGGAAG GGCGCTTGTC TAATGACCCT
ATCAGAGAAT TAGCAACTAA TGAGTTGAAA CTTAAACAAG CATTGAATAA TAAAAAGTTA
CATTTAACTA CTACTTTGTC AACAACAGGT AATCAGGTTA ATTTGATAGC GATCGCCAGT
TTAAAATATA AACCTTGGTC TGTTTTGTTC GCACAGCCTC TAGTTGTTGC CCTTGCACCT
GTAGAAAAGC AAATTCATGA CGCAATGTTT CTATTTGTAT TGATCGCTTC AGTCGTGACA
ATTATCGCTT TTGCTATTGG GCAACTGCTA ACAAGACCAA TAATTTACCT GACCAATATA
GTTTTTCAGT TTACAACAGG TAACTTAAAT ATCCGCGCCA AAATTAGCTC AACAGATGAA
ATAGGTCAAC TGGCGAAATC GTTTAATAAT ATGGCATTTC AGTTACAAAC GTCTTTTGAA
ACCTTAGAAC AACGGGTACA AGAAAGAACA GCAGAGTTAG TAATTGCCAA TCAGAAACTA
GAACAACTGG TAAATCTAGA TGGTTTGACT CAGGTGGCTA ACCGTCGTTG CTTCGATGAA
CGACTAAAAG CAGAATGGAA ACGCCTGGCG CGAGAACAAC AACCCCTGTC ACTGATTTTA
TTCGATGTTG ATAAATTCAA ATCTTACAAC GACTACTATG GCCATCTTGG AGGCGATGAT
TGTCTAATCA CCATAGCGCA AGCTGTGCAA CAGAAGCTTC ATCGTCCTGC TGACTTACTA
GCGCGTTACG GAGGAGAAGA ATTCTCGATA CTCCTCCCCA ATACTGACTT ACTAGGAGCG
ATCAAAGTAG CACAAATTAT TCAACAAGCA ATTTACGATC AAGCCATTCC CCATGCACAG
TCTGATATAA AGGATATCGT TACACTTAGT TTGGGTATTA CTTCTATTAT ACCTGCTGGA
GATATTAATC CTGATACACT CATCGCTTCA GCCGATAAAG CACTGTACAA TGCCAAACAA
CAGGGGCGCG ATCGCTATTG TACTCATGAG ACATAG
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| Protein sequence | MQHDLLGSIR TKLIASFLVV ALIPLLLLAS INKQTTETAL TDNARQALSA AANQTSNRID
AFIDRNLNAV RVEALLPGLA GYLSLTPKAR DDSPEMQLAT ETLNRLSRKD MVHIISYGLL
DLKGKNVLDT YTYTSDISED ESDQDYFQKP LQTGLSFASS MKRSPIIPEL ITIFFSSPVR
NAQGDILGVL RVSYNATVIQ QLVNRETELA GAKSFAILLD ENHIYLAHSH APQLLFKSIV
PLPFDIITQL QREGRLSNDP IRELATNELK LKQALNNKKL HLTTTLSTTG NQVNLIAIAS
LKYKPWSVLF AQPLVVALAP VEKQIHDAMF LFVLIASVVT IIAFAIGQLL TRPIIYLTNI
VFQFTTGNLN IRAKISSTDE IGQLAKSFNN MAFQLQTSFE TLEQRVQERT AELVIANQKL
EQLVNLDGLT QVANRRCFDE RLKAEWKRLA REQQPLSLIL FDVDKFKSYN DYYGHLGGDD
CLITIAQAVQ QKLHRPADLL ARYGGEEFSI LLPNTDLLGA IKVAQIIQQA IYDQAIPHAQ
SDIKDIVTLS LGITSIIPAG DINPDTLIAS ADKALYNAKQ QGRDRYCTHE T
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