Gene Ava_4144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4144 
Symbol 
ID3681220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5168497 
End bp5169150 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content46% 
IMG OID637719490 
Productphospholipase/carboxylesterase 
Protein accessionYP_324638 
Protein GI75910342 
COG category[R] General function prediction only 
COG ID[COG4099] Predicted peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.111836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATCG AACGCCGTTC TGGTTTATTG CCTTATCTAT TCTCCCGCGC CGCAGAAGAG 
ACCAACAAAC CCGCACCCCT CGTATTGTTT CTACATGGGG CGCGCGATCG CGGTACAGAT
ATAAATGTAT TACTAAAATG GGGTCTGCCT CGTTTTGTTG ATGAATCCAG CCCCTTACCC
TACTTTTTTG TCGCGCCCCA ACTTCCTGAA GGCCAGACTT GGGTAGACCG AGAAGCAGAT
GTTATTGCTT TGTTGGATAA TCTGATCGTT TCTCAATCAA TAGATCCTTC CCGTGTCATC
CTATCAGGAT TCAGCTTAGG TACTGCGGGA GCATGGCATA TTGCTGCTGC TCATCCTGGT
CGTTTCGCTG GTTTAGTAGC GGTTTCCGGT CGTGTACCTA AAACCCTAGA AGCAAACCAA
CTAGCTGCAC TCAAAGAAAT TCCCATCCAA ATATTTCAAG GTGCAAAAGA CGAAAAACTG
TCAGTTGAAG ATACACAGCA GATTGTTGAT ACCTTACATG GTCTGGGGGG AACAGTAGAT
TTTACTGTCA TACCTGAAGG GGATCATTTT ATTGCTGATG AAGTGTACAC CGACTCAAAA
TTGCAACAAT GGCTGATTTC ACAGAGCCGT CGTCCTGCTT CTGTAGTCGC CTAA
 
Protein sequence
MSIERRSGLL PYLFSRAAEE TNKPAPLVLF LHGARDRGTD INVLLKWGLP RFVDESSPLP 
YFFVAPQLPE GQTWVDREAD VIALLDNLIV SQSIDPSRVI LSGFSLGTAG AWHIAAAHPG
RFAGLVAVSG RVPKTLEANQ LAALKEIPIQ IFQGAKDEKL SVEDTQQIVD TLHGLGGTVD
FTVIPEGDHF IADEVYTDSK LQQWLISQSR RPASVVA