Gene Ava_4143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4143 
Symbol 
ID3681219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5166886 
End bp5168415 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content46% 
IMG OID637719489 
Productamidohydrolase 2 
Protein accessionYP_324637 
Protein GI75910341 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0344533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAT ATAGCAGACT AAAAAGTTCT CGTTCCGCCG CTATCAAAGC GAAACTCAAT 
TATCCAATCA TCGACACTGA CGTTCATACT AACGATTTCA CCCCAGCCCT TGAGGACTAC
ATTGCTCAAT ATGGTGGCTC GAAACTGGTA GATGAACTGC GCAAGGCAGA ATCTTCTCGT
CTTAACTCCA AGAGCAACGG TAAAGACTGG TATCAACAAA CTCCCGAAGA ACGTCAATAT
AACCGGACAA TTCGCTCTCC TTGGTGGGCG AGAGTTACCC GTAACACATT GGATTTAGCT
ACTTACACTC TTCCTGAGCT ATTCTATGAG CGTCAGGCAG AGCAAGGGTC AGATTATTCG
GTGCTGTTTC CGAATAATGT TTTAGCACCG GCTGGAGCTA GCAAAGAGAA CCGTCAAGCA
TTGCAACGGG CTGTAAATCA CTATCATGCT GATTTGTATC GCAAATATAG CGATCGCTTG
ACTGTAGTTG CTGGTATCCC AATGGGTACT CCTGAAGAAG CTGTTGAAGA ATTAGAATTT
GCAGTAAAAA CACTAGGACT AAAAGTAGCA AATATTCCTG GTGGCGTGAA GCGTCCAATT
AAAGCGATCG CTGATAAGTA CCCAGCAGAT CAATACCCAG AAGTTGCTAA GTATGCTTCA
TACATTGACT TCTACGGATT GGATAGTGAA TATGATTACG ATCCATTCTG GGCAAAGGCA
GTTGAGTTGG GTGTACCTAT TACTACCCAT TATGGTAGCC AAGGTTGGAC TGGACGCTCT
TCCATCAGCA ACTACATGAA CAACCACATC GGTCACTTTG CCGATGGTTC ACAAGCATTT
GCGAAGGCGT TGTTCTTTGG TGGTGTTACC AAGCGTTTCC CACAGTTGCG CGTAGCGATG
TTGGAAGGTG GTGCTGATTG GGGCGCACAC GTTTACATCC ATTTGGTAGA CAGATTCTCC
AAACGGAGTC TCAAAGGTCT GCAAAACTAC AACCCAGACC TGACCAATTT TGATGAATTG
TACGCGTTGT TTGAGCGTTT TGGTAGTGAA TTCTTGCAAG CACACCCCCT CAGCAAAGAA
GAACTGAAAA AGACTGTACT AGGTTCTTCC TTCAACCGTC ATAGTCGCTC GCCCATTGGT
AGCGAACTAG AAGACTTTGC GGCGGCTGGG ATTGAAACCA TTGAAGATAT CCGCGATCGC
TGGGTAAATA GCTTCTTCTT TGGTTCTGAG TCTGACGATC GCACCATTGC AGCTGCATTC
AACGACAAAG CCAATCCCCT GGGTGTGAAA ATCAACGCCA TCTATTCCTC AGATGTTGGT
CACTGGGATG TACCCGACCT CACAGATCCT CTAGCAGAAA GTTGGGATTT GGTACAAGAA
GGTGTGATTT CCGAAGCTGA CTTTAAAGCT TATGTCTTCG CTAATCCCTA CAAGTTCTAC
ACCCAAGCTA ACCCCGACTT CTTCAAGGGT ACAGCAGTTG AATCTAAAGT ACCTGCTCCA
CAAGTAGATA AGAGCCTTGT AGTAGCTTAA
 
Protein sequence
MTEYSRLKSS RSAAIKAKLN YPIIDTDVHT NDFTPALEDY IAQYGGSKLV DELRKAESSR 
LNSKSNGKDW YQQTPEERQY NRTIRSPWWA RVTRNTLDLA TYTLPELFYE RQAEQGSDYS
VLFPNNVLAP AGASKENRQA LQRAVNHYHA DLYRKYSDRL TVVAGIPMGT PEEAVEELEF
AVKTLGLKVA NIPGGVKRPI KAIADKYPAD QYPEVAKYAS YIDFYGLDSE YDYDPFWAKA
VELGVPITTH YGSQGWTGRS SISNYMNNHI GHFADGSQAF AKALFFGGVT KRFPQLRVAM
LEGGADWGAH VYIHLVDRFS KRSLKGLQNY NPDLTNFDEL YALFERFGSE FLQAHPLSKE
ELKKTVLGSS FNRHSRSPIG SELEDFAAAG IETIEDIRDR WVNSFFFGSE SDDRTIAAAF
NDKANPLGVK INAIYSSDVG HWDVPDLTDP LAESWDLVQE GVISEADFKA YVFANPYKFY
TQANPDFFKG TAVESKVPAP QVDKSLVVA