| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4137 |
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| Symbol | |
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| ID | 3681213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5156632 |
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| End bp | 5159238 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637719483 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_324631 |
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| Protein GI | 75910335 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000228127 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0057951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCTGAATT TCACTAAATA TGCGGTCTCT TTGGGAGGAC TAACTTGCTT TTTAATAACC
ACGAATCTTA CAGTATCGGC ACAGACTAAT CAGCAACTAG TCCAAATATC AAAATTAAAT
CTGGAAGTAG ACTCAAGTTT ACGGCAATCC TCCATTATTG ACTCTTCCAA TCCCAAATAT
CGACTACATC AGGGTAGAAG TTCATTTGAG TCTGGACGCT TTGCTGAAGC TGTGAAATTT
TGGGAAGCTG CATATATTGG CTTTAAAAAC CAAGGTGATA TTCTCAATGA AGCTTGGAGT
TTAAGTTACC TGTCCTTGGC TTATCAGAAT TTAGGGGATT GGCCAAATGC AGAAGTTTCT
ATTACTCATA GCTTAAACAT ATTAAAACAT CTCAATGTCC AGAAACAAGG AAACTCTGCT
ATCTTAGCAG TAGCTCTGAA TACTCTAGGT AATCTCAAAC TCTCAACAGG ACAGGCACAA
GCAGCTTTAA AAGCTTGGCA AGATGCGGAA AGTGCATATG CAGTAGCTGG TGATGAAGTG
GGAAAGCTAG GTAGCCAAAT TAACCAAGCC CAAGCAATGC GAGCTTTAGG ATTATATCGC
AGAGGGCAGC AGTTGTTAGT TAATTTGCAT CAAAAGCTGC AAAATCAGCC AGATTCTATC
ATTAAAGCCA AAGCATTACA AAGTTTAGGA ATTGCTTTCC AATTAGTAGG AGATGTGCAA
CAATCTCAAG AAATTTTACA GCAGAGTTTA AAGATTAGTA AAGACTTAAA TTCCGCTACA
GACATTAGCA ATATTCTGTT TAACCTGGGA AATACGGCTA GAGATTTACA ACAAATAGAG
GTAGCTTTTG ACTATTATCA ACAAGTTGTA GCTCAGACAA GTAATTCTCA ATTACGCGTC
GATGCACAGT TGAATCAAAT TAGTCTCTAT TTACAAACTA GACGCAACAA ACCCTCTGAG
GCTTTATTGT CAGAAATTAA GTGGCAATTG GAGAAACTGC CTGCTAGTCG GATGTCTATT
TATGCAGCAA TTAATTTTGT TCGTAATTTG ACTAAATGGT CAAAGCTAGA TGGTAATGAG
TCCATATCAT ATCGAGAATC AGCGCAAATT TTAGCCCGTG CATCACTACA GGCTCAAATG
CTGGGTGATT TGCGCGCTCA AGCTTATGCT TTAAATGAGT TAGGAAAATT GTACTTTGAG
AAGCAGCAGT TAGGTGACGC TTTAAAACTG AGCCAACAAG CACTACAAAT TACTCAAGAG
ATTAACGCTA CTGATATTAG TTATCAAGCG GCTTGGCAAG TTGGGCGTAT TTTGAAAAAA
CAAGGTGACC ATCAGGGTGC GATCGCAGCT TACGATAATT CTGTGAAAAC TCTCAAGTCT
CTGCGTAGTG ACTTAGTAGC GATTAATCGT GATGTTCAGT TTTCTTTTCA GGAGAGTGTG
GAACCAATTT ATCGGGAGTT GGTGGATATA CTACTAGAAT CGCCCCAACC CAGTCAAGGA
AACTTAAAAT TAGCACGAGA GACAATCGAA GCATTGCAAT TAGCAGAGTT AGATAATTTC
TTTCGGGAAG CTTGTTTAAA CGCTAAACCA GAGCAAATCG ATCAAATCGA CAAACAAGCA
GCCGTCATCT ATCCAATTAT TTTAGGCGAT CGCTTAGAAG TAATTTTATC TATTCCTGGC
AAACCCCTCT CTAGTTATCG AACAGTCCTA TCTTCCAGGG AAATGGAAGA CATAATTAAA
CAAACACGCC AATCTCTCAA CCCAATTTTC TCAAATGAGG AAAGGTTAAA TGTTTCTCAA
AAACTTTATG ATTGGCTCAT ACGTCCTCTG GAATCTGAGT TAAGCAAAAG TGGAGTCAAA
ACACTAGCTT TTGTGTTAGA TGGTTCTTTA CGTAATATCC CAATGGCAGT TTTACATGAT
GGCAAACAGT ATTTGCTAGA GAAATACAGT TTAGCACTAT CTCCAGGGAT GCAGTTGATG
CCAGCGCGAT CGCTCAAACG TGAAAATCTC AAATTGATGA CAGCTGCCCT GAGTGAATCA
CGGCAAGGCT TTAAAGCTTT ACCAGCAGTT AAATCGGAGG TAACAGAAAT TTCTGAGGAA
GTTTCTTCAA AACTACTTTT AAATGAAAAT TTTACCGACA CCAACCTTAA GCAAGCTATA
GAATCAACAC CATTTTCGGT GTTACATCTA GCCACTCATG GTCAGTTTAG TAGCCAGTCT
GATGACACTT TTATTCTCAG TTGGAATGAG AAGATTAATG TTAAACAATT GAGCGAATTT
CTGCAAGCCA GAAACGAATC ACAATCTACA CCTGTAGAAT TAATGGTTCT CAGTGCCTGC
CAAACAGCAA AAGGAGACAA TCGAGCTATA TTAGGCTTGG CTGGGGTAGC AGTACGTTCT
GGTGCGCGCA GCACTCTAGC TACTCTTTGG TCAGTAAAAG ATGAGTCTAC TGCTAAATTT
ATGGTGGAAT TTTATAAACA CCTCAGACAA CCGGGTATCA GCAAAGCAGA AGCATTACGA
CAAACTCAAC TAACTTTTTT GCAAAATGCT GATTTTCAAC ATCCTTTTTA TTGGTCAGCA
TTTGTATTGG TGGGTAATTG GCTTTAG
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| Protein sequence | MLNFTKYAVS LGGLTCFLIT TNLTVSAQTN QQLVQISKLN LEVDSSLRQS SIIDSSNPKY
RLHQGRSSFE SGRFAEAVKF WEAAYIGFKN QGDILNEAWS LSYLSLAYQN LGDWPNAEVS
ITHSLNILKH LNVQKQGNSA ILAVALNTLG NLKLSTGQAQ AALKAWQDAE SAYAVAGDEV
GKLGSQINQA QAMRALGLYR RGQQLLVNLH QKLQNQPDSI IKAKALQSLG IAFQLVGDVQ
QSQEILQQSL KISKDLNSAT DISNILFNLG NTARDLQQIE VAFDYYQQVV AQTSNSQLRV
DAQLNQISLY LQTRRNKPSE ALLSEIKWQL EKLPASRMSI YAAINFVRNL TKWSKLDGNE
SISYRESAQI LARASLQAQM LGDLRAQAYA LNELGKLYFE KQQLGDALKL SQQALQITQE
INATDISYQA AWQVGRILKK QGDHQGAIAA YDNSVKTLKS LRSDLVAINR DVQFSFQESV
EPIYRELVDI LLESPQPSQG NLKLARETIE ALQLAELDNF FREACLNAKP EQIDQIDKQA
AVIYPIILGD RLEVILSIPG KPLSSYRTVL SSREMEDIIK QTRQSLNPIF SNEERLNVSQ
KLYDWLIRPL ESELSKSGVK TLAFVLDGSL RNIPMAVLHD GKQYLLEKYS LALSPGMQLM
PARSLKRENL KLMTAALSES RQGFKALPAV KSEVTEISEE VSSKLLLNEN FTDTNLKQAI
ESTPFSVLHL ATHGQFSSQS DDTFILSWNE KINVKQLSEF LQARNESQST PVELMVLSAC
QTAKGDNRAI LGLAGVAVRS GARSTLATLW SVKDESTAKF MVEFYKHLRQ PGISKAEALR
QTQLTFLQNA DFQHPFYWSA FVLVGNWL
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