Gene Ava_4133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4133 
Symbol 
ID3681209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5149845 
End bp5151065 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content41% 
IMG OID637719479 
Producthypothetical protein 
Protein accessionYP_324627 
Protein GI75910331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00393583 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00385756 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATCTGCA AACAGTACAA GAAAATACAT ACAAGCATAT CTCATCAAAC CACTCAAATT 
GCTCTGCATA CGGCAAAACC ACTCTTAGCT TTAGCCACAT TGATAGTAGC TGATGTACCA
GCCCAAGCCA TTACATTTAA CTTTACCTAT CAGCCTGGAA TCACACAGGA ACAGATTGCA
GCAGTTGAGT TAGCAGGAAA TATTTGGTCT GCTTACTTAC AAGATATAGA TGTTGTGGTC
AACATCCATG TCGAGATGAC TGAAGGGGTT TTAGCTGAGG GTAAATTGGG CGGTACAACC
CCAGCAATTA AAAAAATCAA CTATGACAAG TTCAAAGAGG GTTTGGGTGC AGATGGTACG
GCTAATATCT ATCAGTTGCC AACATCTATC TACAGCACTG ATAAATATAG AACTAGACTA
GCAGGCGGCA TCATCAATAA CAGTAACTAT GAACTGCTGA CAACTACAGC CAATAATAAA
GCCCTCGGTA ATGACTTGAG TGGAGATGCT TCTGAATTAG ATGCCTATAT TCAACTGGAA
AAATCGACTA ATTGGAGTTA TAGGTACGCT GGGGGCAAAA TTGAACAGAA CCAATATGAT
TTTGTTAGTG TAGCTGTCCA CGAAATTGGG CATAGCTTGG GATTTATTAG TGGTCTTGAT
GCTTTGAGTG GTTTAGCTTT ACCTACGGCT GTTGATATGT TTCGCTACTC AACTGAGAGT
ACCAAACAAA GAGCAATTGA TTACACAGTG GGTGGAACTA AATACTTCTC AATCAACGGA
GGACAAAATC CATTTAACTT TACTCAAATG GAAGGAAGCA CACCAACTGT ATACCAAGCA
ATATTTTCCA GTGGCGAAAA CACTCTCTTG GGAGGCGATG GGGAGCAGGC TAGTCACTGG
AAAATAGACA GCCAAACCTA TTTAGGGATT ATGTCCTCAA CCATCAGCAT GGGAGGAATT
AAAAAAATTT CCAGACTCGA TCTCACCGTC CTCGATTACA TTGGTTGGCA GGTTGATTAT
TTCCCAATCA TCAATTTGTC CGTCCTATCC ACAAATGCCC AAACCAAAGC ACAAAAAATT
TGGGATTCAC AATTCGATAG TAATACAAAT AACGATGCCA TCCGCGATCG CTCTTCTGAT
GTGCAGCAAA TGATCCAAAA AAGTGGCATT TATAACTGGG GTTGGAGTGG TTATTGGCAA
ACAGCTCATC CTGCACCATA G
 
Protein sequence
MICKQYKKIH TSISHQTTQI ALHTAKPLLA LATLIVADVP AQAITFNFTY QPGITQEQIA 
AVELAGNIWS AYLQDIDVVV NIHVEMTEGV LAEGKLGGTT PAIKKINYDK FKEGLGADGT
ANIYQLPTSI YSTDKYRTRL AGGIINNSNY ELLTTTANNK ALGNDLSGDA SELDAYIQLE
KSTNWSYRYA GGKIEQNQYD FVSVAVHEIG HSLGFISGLD ALSGLALPTA VDMFRYSTES
TKQRAIDYTV GGTKYFSING GQNPFNFTQM EGSTPTVYQA IFSSGENTLL GGDGEQASHW
KIDSQTYLGI MSSTISMGGI KKISRLDLTV LDYIGWQVDY FPIINLSVLS TNAQTKAQKI
WDSQFDSNTN NDAIRDRSSD VQQMIQKSGI YNWGWSGYWQ TAHPAP