Gene Ava_4129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4129 
Symbol 
ID3681205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5142745 
End bp5143272 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content38% 
IMG OID637719475 
Producthypothetical protein 
Protein accessionYP_324623 
Protein GI75910327 
COG category 
COG ID 
TIGRFAM ID[TIGR02595] PEP-CTERM putative exosortase interaction domain 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00365836 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAATTTG GTTCACAACT AGTCCTTACT GCTGTTAGTT TGGTTTTGGG GTTGGCAAGC 
GTGGAAGTAA AGCCAGCATC GGCGGCTCTT GTTAATTATG CTTTTACGGT TAATAGTCCT
ACAAAAACAG GTAGTGGACT ATTTAGATTT GATGACTCAA CTTTGGTTAA CGGCGAGGCA
ATAGTTCAGT CTCTTTCGTT TCAATTTGCA GGTGAGTCTA CTATTTACAC CGAACAAGAT
GATCCTGAAT ACCCAGGGTT TCCTATTGTT TTCCTTAACA ATTTTTCTAC AGGTCAAATA
TCTTTCGCCT TAGATTATCA ATTTGACGAT CAGGCTAATC CTGGTAGTTT TATCAGATAT
GAAATTGCTG GTGAAGATTT TACAATCTAC TCTGTAAATG ATCCAAATGC CGAATTAATA
TCGGGTACAG TTTCTTACAC TAAGGTTCCC GAACCTGCTA TGTTAGGAGG TCTTGTTTTA
GTGGGTACTG TCACTTTCAT GAAGAAGAAA AAACTCGTTA TGAGATAA
 
Protein sequence
MKFGSQLVLT AVSLVLGLAS VEVKPASAAL VNYAFTVNSP TKTGSGLFRF DDSTLVNGEA 
IVQSLSFQFA GESTIYTEQD DPEYPGFPIV FLNNFSTGQI SFALDYQFDD QANPGSFIRY
EIAGEDFTIY SVNDPNAELI SGTVSYTKVP EPAMLGGLVL VGTVTFMKKK KLVMR