Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4129 |
Symbol | |
ID | 3681205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5142745 |
End bp | 5143272 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637719475 |
Product | hypothetical protein |
Protein accession | YP_324623 |
Protein GI | 75910327 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00365836 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAATTTG GTTCACAACT AGTCCTTACT GCTGTTAGTT TGGTTTTGGG GTTGGCAAGC GTGGAAGTAA AGCCAGCATC GGCGGCTCTT GTTAATTATG CTTTTACGGT TAATAGTCCT ACAAAAACAG GTAGTGGACT ATTTAGATTT GATGACTCAA CTTTGGTTAA CGGCGAGGCA ATAGTTCAGT CTCTTTCGTT TCAATTTGCA GGTGAGTCTA CTATTTACAC CGAACAAGAT GATCCTGAAT ACCCAGGGTT TCCTATTGTT TTCCTTAACA ATTTTTCTAC AGGTCAAATA TCTTTCGCCT TAGATTATCA ATTTGACGAT CAGGCTAATC CTGGTAGTTT TATCAGATAT GAAATTGCTG GTGAAGATTT TACAATCTAC TCTGTAAATG ATCCAAATGC CGAATTAATA TCGGGTACAG TTTCTTACAC TAAGGTTCCC GAACCTGCTA TGTTAGGAGG TCTTGTTTTA GTGGGTACTG TCACTTTCAT GAAGAAGAAA AAACTCGTTA TGAGATAA
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Protein sequence | MKFGSQLVLT AVSLVLGLAS VEVKPASAAL VNYAFTVNSP TKTGSGLFRF DDSTLVNGEA IVQSLSFQFA GESTIYTEQD DPEYPGFPIV FLNNFSTGQI SFALDYQFDD QANPGSFIRY EIAGEDFTIY SVNDPNAELI SGTVSYTKVP EPAMLGGLVL VGTVTFMKKK KLVMR
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