Gene Ava_4113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4113 
Symbol 
ID3681501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5126937 
End bp5128100 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content41% 
IMG OID637719460 
Producthypothetical protein 
Protein accessionYP_324608 
Protein GI75910312 
COG category[S] Function unknown 
COG ID[COG2170] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02050] uncharacterized enzyme 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.152835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGATA TAGAATTCAA AAGCTCTCCC GAATTCTCTC TAGGGATGGA AATTGAGTTG 
CAATTACTCA ATCCTGATAC GCTGCAATTG GTAGATGGCA TTTCACCGCT TTTAGCACAA
ACTCCTGAAA ATTCCTGGAT TCAACCAGAA TTTAATCAAG CGATGGTAGA GATTGCCTCT
CAGGTTTGCT CAAATATCCC TGAGTTAGAA GCCAATATTG TTGCTATTCT GCGTGACCTC
AAAACCAGAT GTCAAGCACT GGGTATGACT ATTTGTACAG CCGGAACTTA TCCATGTTGC
GATCGCTTTG CCTCTATCAC CCCTATTCCT AGATATCTGA GTCAGCAAAA TACATCTGGC
TATCTTGCAG ATTTAATGAT GACTTGTGCG CTTCAGCTTC ATGTAGGAAT GCCATCGGGT
GATGTAGCTA TAGATATTAT GGGCAGACTT AAACCATATC TCCCCATTTT GTTGGCTCTG
TCTGCTAGTT CACCCTTTTG GTGGGGTCAC GATACTAGCT TTGCTTCCTT TCGTCAACGG
TTTTTATCAT CGATGAGAAC TTATGGTATT TGCCCCACTT TTAAAAATTG GCAGGATTTT
ACTAATTTCT TTGCCACTGC TCAAAATGCA GGGATGTTTG AGATTATCCG CGATATCCAT
TGGGATTTGC GTCCCCAACC TGATTTCGGA ACTCTTGAGG TGAGGGTAAT GGATGCTCAA
CCAACGATCA AAGAATCGAT GATGCTGGCG GCTTTTATCC ATTCTTTAAT TGTGGATATG
TATCATCACA GTCAAGGAAA GCAAACAGAA TTTTTGCTAA CTCCCCTTCC TTGGTTGATT
GAAAGAGAAA ACTACTTTCG CGCCTCTCGT TGGGGTTTAG ATGCTAATTA TATTGAAGAT
GAACAAGGCA ATAGCAGACC TATCAGGAAT ATAGTTAAAG ATATCTTGAA TGTACTAGCA
GAAACTGCCG ATACTTTGGG AAATAGTTCA TATCTATTCC AATTAGAAAA AAGATTAGAC
CAAGGAGCAA GTTATATTCG ACAACGGCGA GTGTTTGAAA GTACAGGTTC TGTAAAAGCG
GTGGTTGCTT CTTTGGTGAG TGAGTTGGAA GCTGAATTAG CTATTAAGAG CAGACAGGAG
GCTGTAGCCT ACGGCTGGCT GTAA
 
Protein sequence
MGDIEFKSSP EFSLGMEIEL QLLNPDTLQL VDGISPLLAQ TPENSWIQPE FNQAMVEIAS 
QVCSNIPELE ANIVAILRDL KTRCQALGMT ICTAGTYPCC DRFASITPIP RYLSQQNTSG
YLADLMMTCA LQLHVGMPSG DVAIDIMGRL KPYLPILLAL SASSPFWWGH DTSFASFRQR
FLSSMRTYGI CPTFKNWQDF TNFFATAQNA GMFEIIRDIH WDLRPQPDFG TLEVRVMDAQ
PTIKESMMLA AFIHSLIVDM YHHSQGKQTE FLLTPLPWLI ERENYFRASR WGLDANYIED
EQGNSRPIRN IVKDILNVLA ETADTLGNSS YLFQLEKRLD QGASYIRQRR VFESTGSVKA
VVASLVSELE AELAIKSRQE AVAYGWL