| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4105 |
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| Symbol | |
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| ID | 3681570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5108865 |
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| End bp | 5109560 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637719453 |
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| Product | ABC transporter-like |
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| Protein accession | YP_324601 |
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| Protein GI | 75910305 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02982] ABC exporter ATP-binding subunit, DevA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.479165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTCAAT CTTCTATCAT CTCTGTTCAG CACCTTAACC ACTACTTTGG TAAAGGTTCA
TTACGAAAAC AGGTTTTATT TGATATTAGT TTATCAATTA ATCCTGGTGA AATTGTAATT
TTGACTGGCC CTTCTGGTTC TGGAAAAACA ACTTTGTTAA GCCTGATGGC TGGTTTACGG
AGTGTACAAG AAGGTAGCGT TAAAGTTTTT GGTAAAGAAG TATATCGAGC TGGTAATAAA
AAGTTACTGC AACTACGTCG TCAAATTGGA TATGTGTTTC AAAAACATAA CTTAGTTCCC
TTTCTCACTG CTAGCCAAAA TGTACAAATG ACTATGGAAT TAGCTCGTAA TATGTCTCGT
AAAGAAATGT GCTGTCGAGC AGAAGCTATG CTGGAATTAG TGGGTTTAAA TCACCGTATT
CATTATTATC CAGATCAACT TTCTGAAGGA CAAAAACAAC GTGTAGCATT TGCACGGGCA
TTAGTTACTC AACCCCAATT AATTCTAGCT GATGAACCAA CAGCATCGCT AGATAAAAAT
AGCACTCAGA TAGTCGTTGA GACATTAAAA GAACGTGCCA AATATCAAGG CTGTTCCATT
CTTTTAATCA CTCATGATAA TCGCATTCTG GATATGGCTG ATCGCATCAT TTATATGGAA
GATGGTTACT TAAAGAATGA TGTCCGTGCT GCTTAA
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| Protein sequence | MSQSSIISVQ HLNHYFGKGS LRKQVLFDIS LSINPGEIVI LTGPSGSGKT TLLSLMAGLR
SVQEGSVKVF GKEVYRAGNK KLLQLRRQIG YVFQKHNLVP FLTASQNVQM TMELARNMSR
KEMCCRAEAM LELVGLNHRI HYYPDQLSEG QKQRVAFARA LVTQPQLILA DEPTASLDKN
STQIVVETLK ERAKYQGCSI LLITHDNRIL DMADRIIYME DGYLKNDVRA A
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