| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4098 |
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| Symbol | |
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| ID | 3681563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5091103 |
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| End bp | 5092311 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637719446 |
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| Product | hypothetical protein |
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| Protein accession | YP_324594 |
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| Protein GI | 75910298 |
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| COG category | [K] Transcription |
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| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.342554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.804601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCAC GTCAAAATAT CACTGAACAG TTTACGACCT TCTTGCAATT CGATACTGAC
AAAGCAATTA GTTGGGAAGT TGATGCTAGA CTGCACAGAA ATCTAATTAA CTGTCAAACA
CGTCTTTCAC AGCCAGAAAA TTCCGAATCT TTTTGGGTGT GTTACTGGTA TAAAGTATGG
CAAGAGAAAC CTGATGGTTT AGCCAGGGGA CATTTTTCAG CTTATTTACA AGAAGTCTGT
TACTGGGCTG TTCACAAAAT AGTTACTAAT CTTTCCTCTA CCCAACACAC ACTATCTGAC
TGCTTTCAAA TGGTGATCAT TCGGGTTGAT AAGGTGTTGA AAGGGTTTAA ACCCAACCTG
AACTTTAACC TGAAAAATTA TGCTAGTGCG ATTTTTAGCA GCGAATTCAA AGAAATGCTG
CGATCGCAAA ACGAAATTGA TATTTGTACT AATTGGCGAT TATTAAGAAA GTTAACTCAA
AAGCGGCTAG TAGAGTCTTT ACAAAATCAG GGAATCCATG AGGATGTTAT CCAACGCTAT
GTATTAGCGT GGAAATGCTA TCAAGCGTTA TACGCTCCTA AGCAAATTGT CGGTACTCGC
AAATTATCTA GACCAGATGA TGCCACATGG ACAGCGATCG CTCAACTTTA TAATTTCCAA
CGTCAAACCC AACTTTCACA ACCAGGGCCA GAGTGCAGTC GAGAAACCAT AGAGAAATGG
TTGATTATTT CTGCTCAAGC CGTAAGAGAT TATTTATACC CCAATATGAT TTCCCTGAAT
GTCTCAGTAG GGGAGGAAAA TTCTGGAGAT GAATATATAG ATATAGTACC GCAACTCAAG
CAGGAGTCCT TGATGACAGA AATTCTGGCT CAAGAAGAAC TGCTCGACCG ACAATCACAA
CAAGCGCAAA TTAGCAACGT CCTAGTTACA GCTTTAACTG AACTAGATCC AGAAGCCCAC
AATATCATCC AACTTTACTA CAGAGAAGGC TTAACTCAAC AGCAGATTGC TCAACAGCTA
GGAATTAAGC AGTACACCAT TTCTCGTAGG CTGGCTAAAG TCAAAGATTT TTTGCTCCTC
AAACTTGTAA CGTGGAGTCA ACAATCGCTG CATATTTCTT TAAACTCGCT GGTACTCAAC
TATGTAAGCA CCATTCTCGA AGAATGGTTA CAAACTTACT ATCACCGTTC TCTCTCTGAA
TCACAATAG
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| Protein sequence | MRSRQNITEQ FTTFLQFDTD KAISWEVDAR LHRNLINCQT RLSQPENSES FWVCYWYKVW
QEKPDGLARG HFSAYLQEVC YWAVHKIVTN LSSTQHTLSD CFQMVIIRVD KVLKGFKPNL
NFNLKNYASA IFSSEFKEML RSQNEIDICT NWRLLRKLTQ KRLVESLQNQ GIHEDVIQRY
VLAWKCYQAL YAPKQIVGTR KLSRPDDATW TAIAQLYNFQ RQTQLSQPGP ECSRETIEKW
LIISAQAVRD YLYPNMISLN VSVGEENSGD EYIDIVPQLK QESLMTEILA QEELLDRQSQ
QAQISNVLVT ALTELDPEAH NIIQLYYREG LTQQQIAQQL GIKQYTISRR LAKVKDFLLL
KLVTWSQQSL HISLNSLVLN YVSTILEEWL QTYYHRSLSE SQ
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