Gene Ava_4093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4093 
Symbol 
ID3681558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5085609 
End bp5086040 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content42% 
IMG OID637719441 
Productpentapeptide repeat-containing protein 
Protein accessionYP_324589 
Protein GI75910293 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.864447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.810345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACT TATCTAATCA ACCAGTGAAA AGCGCTCATG AACTCAAAAG AAAGTATGAA 
GCAGGAGAAA GAGACTTTCG TGCAGCTGAG TTATCTAAAG CTGACTTACA AGAAACTTAT
TTAGAAGGAG TAGACCTGAG TGGAGCTAAC TTGGATGCAG CCAAACTTAG TAAAGCAGAC
TTGAGTGGTG CTAATCTCAG TGGAGTTTAT TTAAGAAAGG CAAATCTGAG GGGAGCCAAC
CTCAGTGGTG CAGATTTGTT TAAAGATAAA TTGGTGGGAG CAGATTTGAG TGAAGCTGAT
CTCCGAGGCG CAGATTTGAG AGGAGCTAAC TTGAACGGGG CTAACTTAAA TGCAGCCAAA
TATGACAGCT ACACAGTTTT TCCAGAGGAT TTTGACCCTA TAAGCGCCAA AATGATGCAG
TTGGAGGAAT AA
 
Protein sequence
MQNLSNQPVK SAHELKRKYE AGERDFRAAE LSKADLQETY LEGVDLSGAN LDAAKLSKAD 
LSGANLSGVY LRKANLRGAN LSGADLFKDK LVGADLSEAD LRGADLRGAN LNGANLNAAK
YDSYTVFPED FDPISAKMMQ LEE