Gene Ava_4079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4079 
Symbol 
ID3681602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5068880 
End bp5069845 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content41% 
IMG OID637719430 
Productrhodanese-like protein 
Protein accessionYP_324578 
Protein GI75910282 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.361854 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGA TACGGAAATT TTCTTGGGCA AAGTTTAAGA AAAACAAACT ACTTGCTCTA 
GGAGTAGCAA TTTGTACTTT TTTGTTACTC ACTCCCATGT TGCATTTACC AGCCAGGGGA
GCTGCGACTA GCACTAAGAT CCAGTTCGTT GCTCCTAACT GGGTGGCCGA GAATGTCAAA
GATCCTAATC TGAGAATTTT GGATGTCCGA AATTTACCTT TAGACTATAT CGATGGACAC
TTACCTCAAG CAGTTAATAT TGCCGATACA GCCTTTCGCG GCCCAAGAGA AGGTCTACCA
GTACAATATT GGGACAATCA AAAATTAGGA CAAATATTTG CTAATTCAGG AGTCACAAAT
AATAATCGTG TCCTTGTTTA CTCTGATGGC AGAGATGTAC TAGGGGCAAC GATGGTAGCT
TATTTGCTAG AACGTTCTGG AGTGCAGGAT ATAGCTGTAT TGGATGGTGG CTACAAAGGT
TACGCGGCTG CATCGGCAAC AGTAACAAAG GAATTTCCTA AATACAAAGT AGGTCGATTT
ATAGTTAAAG ATAATCCTGC TGTGCGTGTC TCTTTAAGTG AAGTCAGAAA ACTGATTGGG
AAAAAAGGCG TTACATTCAT CGACCCCAGA CCAGCAGATT TATTCCAAGG AAAGGAAAAT
CTTTGGGTAC GAAATGGACA TATTCCAGGG GCGCGAAATA TTCCTTGGCC TACTTTTACA
GATGCTCAAA ATCCCCACAA ACTAAAATCT TTAGATGAAA TCAAACAAAT CCTAGCTGAC
AAGAAAATTA CTCCTGCTGA TGACATCATT GTTACTTGCA GTACAGGACG GGAAGCAACT
CTGCAATATG TGGTATTAAA ACATTTGCTG GGTTATCCCA AAGTTAGAGT TTATGAAGGT
TCTTGGACTG AGTACAGCAC TCAATCAGAC TTACCTGTTG CCACTGGCCC AGAACAGGTA
AGCTAG
 
Protein sequence
MMKIRKFSWA KFKKNKLLAL GVAICTFLLL TPMLHLPARG AATSTKIQFV APNWVAENVK 
DPNLRILDVR NLPLDYIDGH LPQAVNIADT AFRGPREGLP VQYWDNQKLG QIFANSGVTN
NNRVLVYSDG RDVLGATMVA YLLERSGVQD IAVLDGGYKG YAAASATVTK EFPKYKVGRF
IVKDNPAVRV SLSEVRKLIG KKGVTFIDPR PADLFQGKEN LWVRNGHIPG ARNIPWPTFT
DAQNPHKLKS LDEIKQILAD KKITPADDII VTCSTGREAT LQYVVLKHLL GYPKVRVYEG
SWTEYSTQSD LPVATGPEQV S