Gene Ava_4073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4073 
Symbol 
ID3681596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5061519 
End bp5062496 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content38% 
IMG OID637719424 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_324572 
Protein GI75910276 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.429453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.578065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATAA GTGCTGATTC TGAATTAAAT CAATGGTTGG AAATGTTGCG ATCGCCTGAT 
GTCAATGACC GCTTAGTAGC TGTAAAAACT CTACAGCATC TCGGCGAAGA AGAGACAATT
GATGCTTTAA TTATTGCCCT CAAAGATGAA AGTGTAGCTG TCCAGAAAAT AGCTATATCT
GCTCTTTGGG AAATTGCCAA TCCTGTGGCG ATTCCTGCTT TAATTGAATG CTTGAGTTTG
CAAGATGAAG ATATTAGGAG TGAAGCTGCA TCAGCATTAA ATGAGTTAGT TAGTCAAGAT
GATTTATTAC TTTTATTAGA TAAACTCCAA ATTGATGATA TCAATACACA ACTCAATATT
TTAGTGCTGC TGCGTAAAAT TCATGATATT CAATCTTTAC CCTATATATT ACCATTTTTA
CAATCACATA ATTCTGAGTT AAGAGAAGCT GCAATCACTA CATTGCGATA TCTTAATCAA
CTAGAAAAAT GCTCCGAAGC TTTAGATTTA ATCTTTGATG AATCAGCAGT TGTGCGACGG
GCTGCGGCTT TAACTCTGGG ACATTTACAA GATACAGAAG TAATTACTAA ACTCAGTCAA
GCACTGACTA ATGATAGTGA CTGGCAAGTG CGGCGTAATG CGGCTAAATC TCTAGCTATT
CATGCAAATC ATCAAGCAAT TTTAGCCTTA GAAACTGCTT TAAGTGATGA ACATTGGCAA
GTCAGGAAAG CATCTGCACA AGCCTTACAA AAAATCCCAG ATACTCAAGT TATGCCGCAA
TTAATTCAAG CTTTAACAGA TGAATATGCA GATGTTCGCA AAGAAGCTGT AATTGCTCTT
GTTAACTTGG CTCATTCTGA TGTGATCATC CCTCTGCAAC AGGCTTTAGA TGATCCTGAT
AGGGAGGTTG CTATTCAAGC GCAACGAGCG ATTAACAAGA TACAAACAGA TATTGTTTTT
AACGCGGAGG AACGCTAA
 
Protein sequence
MSISADSELN QWLEMLRSPD VNDRLVAVKT LQHLGEEETI DALIIALKDE SVAVQKIAIS 
ALWEIANPVA IPALIECLSL QDEDIRSEAA SALNELVSQD DLLLLLDKLQ IDDINTQLNI
LVLLRKIHDI QSLPYILPFL QSHNSELREA AITTLRYLNQ LEKCSEALDL IFDESAVVRR
AAALTLGHLQ DTEVITKLSQ ALTNDSDWQV RRNAAKSLAI HANHQAILAL ETALSDEHWQ
VRKASAQALQ KIPDTQVMPQ LIQALTDEYA DVRKEAVIAL VNLAHSDVII PLQQALDDPD
REVAIQAQRA INKIQTDIVF NAEER