Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4073 |
Symbol | |
ID | 3681596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5061519 |
End bp | 5062496 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637719424 |
Product | HEAT repeat-containing PBS lyase |
Protein accession | YP_324572 |
Protein GI | 75910276 |
COG category | [C] Energy production and conversion |
COG ID | [COG1413] FOG: HEAT repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.429453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.578065 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTATAA GTGCTGATTC TGAATTAAAT CAATGGTTGG AAATGTTGCG ATCGCCTGAT GTCAATGACC GCTTAGTAGC TGTAAAAACT CTACAGCATC TCGGCGAAGA AGAGACAATT GATGCTTTAA TTATTGCCCT CAAAGATGAA AGTGTAGCTG TCCAGAAAAT AGCTATATCT GCTCTTTGGG AAATTGCCAA TCCTGTGGCG ATTCCTGCTT TAATTGAATG CTTGAGTTTG CAAGATGAAG ATATTAGGAG TGAAGCTGCA TCAGCATTAA ATGAGTTAGT TAGTCAAGAT GATTTATTAC TTTTATTAGA TAAACTCCAA ATTGATGATA TCAATACACA ACTCAATATT TTAGTGCTGC TGCGTAAAAT TCATGATATT CAATCTTTAC CCTATATATT ACCATTTTTA CAATCACATA ATTCTGAGTT AAGAGAAGCT GCAATCACTA CATTGCGATA TCTTAATCAA CTAGAAAAAT GCTCCGAAGC TTTAGATTTA ATCTTTGATG AATCAGCAGT TGTGCGACGG GCTGCGGCTT TAACTCTGGG ACATTTACAA GATACAGAAG TAATTACTAA ACTCAGTCAA GCACTGACTA ATGATAGTGA CTGGCAAGTG CGGCGTAATG CGGCTAAATC TCTAGCTATT CATGCAAATC ATCAAGCAAT TTTAGCCTTA GAAACTGCTT TAAGTGATGA ACATTGGCAA GTCAGGAAAG CATCTGCACA AGCCTTACAA AAAATCCCAG ATACTCAAGT TATGCCGCAA TTAATTCAAG CTTTAACAGA TGAATATGCA GATGTTCGCA AAGAAGCTGT AATTGCTCTT GTTAACTTGG CTCATTCTGA TGTGATCATC CCTCTGCAAC AGGCTTTAGA TGATCCTGAT AGGGAGGTTG CTATTCAAGC GCAACGAGCG ATTAACAAGA TACAAACAGA TATTGTTTTT AACGCGGAGG AACGCTAA
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Protein sequence | MSISADSELN QWLEMLRSPD VNDRLVAVKT LQHLGEEETI DALIIALKDE SVAVQKIAIS ALWEIANPVA IPALIECLSL QDEDIRSEAA SALNELVSQD DLLLLLDKLQ IDDINTQLNI LVLLRKIHDI QSLPYILPFL QSHNSELREA AITTLRYLNQ LEKCSEALDL IFDESAVVRR AAALTLGHLQ DTEVITKLSQ ALTNDSDWQV RRNAAKSLAI HANHQAILAL ETALSDEHWQ VRKASAQALQ KIPDTQVMPQ LIQALTDEYA DVRKEAVIAL VNLAHSDVII PLQQALDDPD REVAIQAQRA INKIQTDIVF NAEER
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