Gene Ava_4070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4070 
Symbol 
ID3681593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5059940 
End bp5060722 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content37% 
IMG OID637719421 
ProductMerR family transcriptional regulator 
Protein accessionYP_324569 
Protein GI75910273 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.487071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.354959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATTT ATAATTCCAT CGGTAAACAA TATTCCCAAA CTCGTGTTCC TGACATTCGC 
ATCGTCAATG CAATAATTAA TCTACTCAAT TTACCAAAGG GTAGCGTTAT CGCTGATATT
GGTGCTGGTA CTGGTGGTTA TAGTGTAGCC TTGGCTAACC AAGGATTGTT TGTTTATGCT
GTTGAACCTT CTATTGTGAT GCGACAGCAA GCGGTTGTAC ATCCTCAAGT GGAATGGTTT
ACTGGCTATG CAGAAAATTT AGCTTTACCA GATAAATCTG TTGATGGTGT TATCAGTATT
TTAGCGATAC ATCACTTTTC GCATCTTGAA AAATCCTTCC AAGAAATGCA AAGAATTATT
AGAGATGGGA CAATCGTTTT ACTAACTTTT GATATTAGAC TCGCTCAAAG AATTTGGCTG
TATGATTATT TTCCCTTTTT GTGGGAAGAC GCTTTACGAT TTTTACCCCT TGACGAACAA
ATTAATTTAC TTCAGGAAAA TACTAAAAGG CGTGTTGAAG CCATACCATT TTTATTACCA
CACGACTTGT CTGATTTATT CGCCGCCGCA GCTTGGAGAC GACCAGAATT ATATCTGAAA
GCCGAAGTAC GGGCGGGTAT ATCATCTTTT GCGTTAGCTA ATCAAGATTT AGTAGAAAAA
GGATTAGAGT TACTTACAGC CGATTTAAAT AATGGAGAAT GGATAAGAAA ATATGGTGAA
ATTCATCATC TGCAAGAAAT TGATATAGGC TATCGCTTTA TTTATACAAC ACTCGATAAA
TGA
 
Protein sequence
MSIYNSIGKQ YSQTRVPDIR IVNAIINLLN LPKGSVIADI GAGTGGYSVA LANQGLFVYA 
VEPSIVMRQQ AVVHPQVEWF TGYAENLALP DKSVDGVISI LAIHHFSHLE KSFQEMQRII
RDGTIVLLTF DIRLAQRIWL YDYFPFLWED ALRFLPLDEQ INLLQENTKR RVEAIPFLLP
HDLSDLFAAA AWRRPELYLK AEVRAGISSF ALANQDLVEK GLELLTADLN NGEWIRKYGE
IHHLQEIDIG YRFIYTTLDK