Gene Ava_4067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4067 
Symbol 
ID3681590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5056725 
End bp5058434 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content43% 
IMG OID637719418 
Productputative oxidoreductase 
Protein accessionYP_324566 
Protein GI75910270 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.594531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCA ATACTCAAAA GATCAAAACT GATGTACTCG TTATAGGTGG AGGTACTGCG 
GGAACAATGG CAGGTATTAA AGCCAAGCAA GCAAATCCTG ATGCAGAGGT GCTGATATTA
GAAAAGGCTA ACATACGTCG GAGTGGTGCG ATCGCAATGG GGATGGATGG CGTAAACACC
GCAGTCATCC CCGGACATTC CACCCCAGAA CAGTACGTCC GGGAAATCAC CCTCGCTAAC
GATGGTATTC TCAACCAAAA AGCTATATAT CAAACAGGTA AATTAGGTCA CGAAGTCATT
CAAGAATTAG AAAGCTGGGG CGTGAAATTT CAAAAAGATG CCCAAGGTAA TTATGACTTA
AAACAAGTGC ATCGTGTGGG TAAATACGTC TTACCCATGC CAGAAGGTAA AGACCTGAAA
ACCATCCTCA CCCGCCAAGT TAAACGCCAC AAAGTCAAAG TCACAAACCG TGTGATGGCT
ACTCGTATTT TAGTCAAAGA CGGACGTGCT GTTGGCGCGG TAGGATTTGA TGTGAGAAAC
GGCGACTACA TAATCATTCA AGCCAAAGCC GTCATTTTGT GTACAGGCGC TTGTGGCAGA
CTCGGCTTAC CCGCTTCCGG CTATCTCTAC GGCACTTACG AAAATCCTAC CAACGCTGGC
GATGGCTATT CAATGGCTTA TCACGCAGGC GCAGAACTCA GCAACATTGA ATGTTTTCAA
ATTAATCCCT TAATTAAAGA TTACAACGGC CCTGCCTGCG CCTATGTCGC TGGGCCATTT
GGCGCACATA CAGCCAACGC CGAAGGAAAT CGCTTCATTA GTTGCGACTA TTGGAGTGGT
CAAATGATGT TGGAAATCTG GAAAGAATTA AACTCAGGAA AAGGGCCAGT CCAACTCAAA
ATGACCCATC TTGATGAAGA TACAATTGCC GAAATTGAAT CTATACTTTG GGCAAATGAA
AGACCAAGTA GAGAACGTTT TCATCAAGGG AGAAATGAAG ATTACCGCAC CCACGGCGTA
GAAATGCACA TTTCTGAAAT CGGCTTATGT AGTGGTCATA GTGCTTCTGG GGTGTGGGTA
AATGAAAACG CCCAAACCAC AGTTCCCGGT CTATATGCAG CCGGCGACAT GGCCAGCGTT
CCCCATAATT ATATGATTGG CGCATTTGTT TTTGGTCGCA TAGCCGGAAC TCATGCCATT
GAATATATTC AAGATTTAGA TTTTGTCGAA CCAGATGCCG AGTTTCTAGA AACAGAAAAA
GCCAGAATTT ATGCCCCATT AACTAGAGCA AATGGCATAC CCCATACTCA AGTAGAATAT
AAACTCAGAC GCTTAGTTAA TGATTATCTC CAACCACCGA AATCAGGCAA CAAAATAGAG
ATTGGCTTGA AACAGTTTGT TCAATATCAA CAAACATTAG ATTTAATGGG TGCGCGTGAC
CCCCATGAAT TAATGCGTTC TCTGGAAGTA CATTTTATTC GAGACTGTGC AGAAATGGCA
GCCAGAGCAT CATTATATCG TCAAGAAACT CGTTGGGGAC TATATCATTA CCGCTTAGAT
TATCCAGAAA AAAATGATGA TGAATGGTTC TGTCACGTCA ATTTAAAGAA AGACGATTCA
GGACAAATGG TATTATTCAA GCGTCCTGTA GAGCCTTATA TTGTGGAAGT AGATACAGTT
AAAGAATTAT ACAGTGTAGC TGTAAAGTGA
 
Protein sequence
MDINTQKIKT DVLVIGGGTA GTMAGIKAKQ ANPDAEVLIL EKANIRRSGA IAMGMDGVNT 
AVIPGHSTPE QYVREITLAN DGILNQKAIY QTGKLGHEVI QELESWGVKF QKDAQGNYDL
KQVHRVGKYV LPMPEGKDLK TILTRQVKRH KVKVTNRVMA TRILVKDGRA VGAVGFDVRN
GDYIIIQAKA VILCTGACGR LGLPASGYLY GTYENPTNAG DGYSMAYHAG AELSNIECFQ
INPLIKDYNG PACAYVAGPF GAHTANAEGN RFISCDYWSG QMMLEIWKEL NSGKGPVQLK
MTHLDEDTIA EIESILWANE RPSRERFHQG RNEDYRTHGV EMHISEIGLC SGHSASGVWV
NENAQTTVPG LYAAGDMASV PHNYMIGAFV FGRIAGTHAI EYIQDLDFVE PDAEFLETEK
ARIYAPLTRA NGIPHTQVEY KLRRLVNDYL QPPKSGNKIE IGLKQFVQYQ QTLDLMGARD
PHELMRSLEV HFIRDCAEMA ARASLYRQET RWGLYHYRLD YPEKNDDEWF CHVNLKKDDS
GQMVLFKRPV EPYIVEVDTV KELYSVAVK