| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4060 |
|---|
| Symbol | |
|---|
| ID | 3681681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 5046694 |
|---|
| End bp | 5048577 |
|---|
| Gene Length | 1884 bp |
|---|
| Protein Length | 627 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637719411 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_324559 |
|---|
| Protein GI | 75910263 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0156752 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.194218 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTTA AATTTACTCC AATAAATAAC AATATTATTC ATGGAGTTAC TAGCAATGGT
AACTCTTTTC CAGAACATAA TGATGCTTAT AGCTCTGAAC TCAGGATTGA CGATATATTA
AGCTCAAACT TTCATAGTAG TTTTTCAACT CAGCAAGATA ATACATTATT GTCGGCAACT
GTCTCAAATA CTAATACTCA TCTCACTGCT CAAACAATTG ATGTTACATC TAGTCAACCA
GACTTAATCA TCCAAAATGC TGTAGTTCCT AGTACAGCAT CAATTGGAAC TACTATCCAA
GTAAACTATG TAGTTAAGAA CCAAGGCTCG GAGAATACTT TCTCTAGCTA TACTATGTTT
TTCTTATCGA GAGATAGAAA TGTGAGTGAT GATGATTATT ACTTAGGTTC AGACTATGTT
GACGGTATTG CAGCAGGCGC TTACAGTTCA GAATCAAGCA CACTCAGAAT TGATAATGGT
ATTGTCGCTG GTAGCTATTA TTTATTGTGC CAAGCTGATG GCAATGGAGA TTTTATTGAA
AGTAATGAAA CCAACAACAT TTTAGCGACA GCCATCAATA TTAATCTGAT TCAGACAGAT
TTAGTTGTTC AGAATCCTGT AGCACCTAGT TCAGTAACTG TTGGGTATAG CTTTAGAATT
AGTTATCGAG TTAAAAACCA GAGTGTGGGT AATGCTTTTC CTAGCTCTAC GATGTTTTAT
ATATCTAAAG ATAAAACTAT CAGCAATGAT GATCTATATT TAGGTTCCCA GGATGTTGGT
AGTATTCCAG CAGGTGCTTA TAGTTCACAA ACAACTTCAC TGAGGATTGT GAATAATATC
ACCGCAGGTA AATATTATCT GCTGTACAAA GCTGATGGTA ACAACAATTT GATTGAAACC
AATGAAGGCA ATAACATTGT TGCTAAAGCT ATCAACATCA AGAATAGTTT TCGCTCTACC
AATGGTTATG GCTTAATTAA TGCCGCCGCC GCAGTAGCTC AAGCCTTAGG TCAGACAACC
TTTGGTGATG TTGTTAATTT AGGTGGTAAC AATTGGGGTG CAGACCTCAT TAACGCACCA
GAAGTCTGGG CAAAAGGATA TACAGGTCAA GGAATTACTG TCGCTGTTGT AGATGGTGGG
GTTGACCGCA ACCATACCGA TTTGAGCAGT AATATCTGGA AAAATCTTAA AGAAATTGCT
GGTAACGGTA AGGATGATGA TGGCAATGGC TATATTGATG ATGTTTACGG CTGGAACTTT
GTTGACAACA ACAACAATAC CTTAGACAAA AATGGACATG GGACTCATGT AGCTGGGACT
ATTGCCGGGG TAAGAAATAG CTTTGGTGTT ACAGGTATTG CCTATAATGC CAAGATTATG
CCAGTGAAGG TTTTGGCTGA TAATGGTTCA GGTGCTGATA ATGCTATCGC TCAAGGTATT
CGTTATGCGG CAAACAATGG AGCCAATGTG ATTAACTTGA GTTTAGGTAA AGAGCAACCT
AGTATTAATA TCCAATCGGC TATTCAATAT GCTAGCAGCA AAGGCGCGAT CGTGGTTATG
GCAGCAGGAA ACGGTGGTCA GCTAACACCA TACTACCCTG CTAGATATGC CACAGACTGG
GGGCTAGCGG TAGGCGCAGT TGATAAGTCT GGAATTATGG CTAGCTTCTC TAACCTCGCC
GGAAATGAGC TATTGAGCTA TGTCACAGCC CCTGGTGTTG GTATTTATTC GACACTTCCT
GGTAACAAAT ATGCTTCTTG GAATGGAACA TCTATGTCCA CTCCTTATGT TGCTGGGGTA
GTCGCTTTGA TGCTGAGTGC TAATAAAAAT TTAACTGATT CCCTCGTGCG TCAAATCCTT
ACATCTACCG CAGCCAATAG ATAA
|
|---|
| Protein sequence | MQVKFTPINN NIIHGVTSNG NSFPEHNDAY SSELRIDDIL SSNFHSSFST QQDNTLLSAT
VSNTNTHLTA QTIDVTSSQP DLIIQNAVVP STASIGTTIQ VNYVVKNQGS ENTFSSYTMF
FLSRDRNVSD DDYYLGSDYV DGIAAGAYSS ESSTLRIDNG IVAGSYYLLC QADGNGDFIE
SNETNNILAT AININLIQTD LVVQNPVAPS SVTVGYSFRI SYRVKNQSVG NAFPSSTMFY
ISKDKTISND DLYLGSQDVG SIPAGAYSSQ TTSLRIVNNI TAGKYYLLYK ADGNNNLIET
NEGNNIVAKA INIKNSFRST NGYGLINAAA AVAQALGQTT FGDVVNLGGN NWGADLINAP
EVWAKGYTGQ GITVAVVDGG VDRNHTDLSS NIWKNLKEIA GNGKDDDGNG YIDDVYGWNF
VDNNNNTLDK NGHGTHVAGT IAGVRNSFGV TGIAYNAKIM PVKVLADNGS GADNAIAQGI
RYAANNGANV INLSLGKEQP SINIQSAIQY ASSKGAIVVM AAGNGGQLTP YYPARYATDW
GLAVGAVDKS GIMASFSNLA GNELLSYVTA PGVGIYSTLP GNKYASWNGT SMSTPYVAGV
VALMLSANKN LTDSLVRQIL TSTAANR
|
|---|
| |