| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4057 |
|---|
| Symbol | |
|---|
| ID | 3681678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 5042317 |
|---|
| End bp | 5043093 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637719408 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_324556 |
|---|
| Protein GI | 75910260 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.000829153 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0850565 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAA TTAGTCTTTC TTTAATAGCC GGATTAGCAT CTAGTTTTTT ACTGGCTCAA
CCTACTCATG CTGCCACACT AGGTCAAAAT TTAATTATCA ATGGTGATGC AGAGCAAGGA
TTAGGAGACT CCATAGGTAA TGCAGTCGGT GCTGACATTC CCTTGATTCC AGGTTGGACT
ACAACTGGTA ATTTTAGTGT GTTGGAATAT GGAGCAACAG GCTTTGAATT TACTAATGGC
CTTGGTAATG TCGTGAGAGT TAACCTACCA GATGTTAATG TTCCTGGCCC AGATGACAGA
GGTAAAAATC TCTTTTTTGG TGGTGCTAGT AGAGCCTCAT CTAGTGCTTC CCAATCTATT
GATGTCAATA GTATTGCTTC AGTAATTGAT GCAGGTAAAG CAGTTTTTGA TTTGAGTGGT
TGGTTAGGTG GATATGATGA TGATGACGAT ATTGCAACAC TCAATATTAC TTTCCTTGGG
CAGACAAACC AATCTCTAGG AATTGCTAAT ATTTCTGCGC CAAATGCAGC CGAAAGAAAT
AACGTTACAG GGTTATTTTT GCGAGGAACT AATGGTTTTG TTCCTGCCGG AACACGTCAA
ATTAATGTAG TTCTAAATGC CAATCATACA GGAGGTCGAG TCAACGACTC TTATGCTGAT
AACCTCTCAT TAGTAATTAC TCAAGTCCCA GAACCCACAA TATCAGGTTT ATCGCTGCTG
ATTGCATCAG GTTTAATGAC TAGAAAATTG CGGAGAAGCC GCCGCCAATT TAATTAA
|
|---|
| Protein sequence | MNKISLSLIA GLASSFLLAQ PTHAATLGQN LIINGDAEQG LGDSIGNAVG ADIPLIPGWT
TTGNFSVLEY GATGFEFTNG LGNVVRVNLP DVNVPGPDDR GKNLFFGGAS RASSSASQSI
DVNSIASVID AGKAVFDLSG WLGGYDDDDD IATLNITFLG QTNQSLGIAN ISAPNAAERN
NVTGLFLRGT NGFVPAGTRQ INVVLNANHT GGRVNDSYAD NLSLVITQVP EPTISGLSLL
IASGLMTRKL RRSRRQFN
|
|---|
| |