Gene Ava_4046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4046 
Symbol 
ID3682175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5030014 
End bp5030841 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content42% 
IMG OID637719398 
Productnitrogenase iron protein 
Protein accessionYP_324546 
Protein GI75910250 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01287] nitrogenase iron protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.316801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.245716 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAAGA TTGCTATTTA CGGTAAAGGG GGCATTGGTA AATCTACAAC TACCCAAAAT 
ATGGTAGCTG GTTTAGTGGA AATAGAGCGT AAGGTGATGG TGGTTGGATG TGACTCCAAG
GCTGATTCTA CCAGGTTGTT GTTAGGAGGA CTGCACCCCA AGATTGTTTT AGATACCTTA
CGTCAAGAAT CAGACGATTT GCATTTAGAA GATTTATGCA AAGAAGGCTG GGGTAAGACA
TTTTGTGTGG AATCGGGCGG CCCTGAACCT GGTGTGGGAT GTACAGGTAG GGGTGTAATT
ACATCCATTG GCTTGTTAGA ACAACTTGGT GCTTATGATG AAAAACTCCA ACTTGATTAC
ACTTTTTATG ATGGTTTGGG TAGTGTGGTG TGCGGTGGCT TTGTAATGCC GATGCGGGAA
AGAAAGGCGC AAGAAGTTTA TATCGTTACT TCTGGCGAAA TTATGGCTAT GTACACCACT
AACAACATCT GTCGAGGGAT TCACAAATAT ACGGTTATTG GCGGTGTGCG GCTGGGAGGC
TTAATTTGCA ACTCTCGCAA TATTGAGCAA GAAGATGATT TAGTTAAGGC TTTTGCGGAA
GAATTAGGAA CTCAAATGAT TGCCTTTATT CCCAGAGACA AAATTGTACA GCAAGCGGAA
TTTTATAGTC AGACGGTGAT TGAGTATGCA CCTCATTGCG AACAAGCACA GCATTACCGT
AACTTAGCCA AAGCCATTGA CCAAAACACA AATTTTGTTA TTCCCAAACC TTTATCTGAT
GAACAGCTAG AAGAACTGTT GGTCAATTCT GGAGTTTTGA GCGTATAA
 
Protein sequence
MRKIAIYGKG GIGKSTTTQN MVAGLVEIER KVMVVGCDSK ADSTRLLLGG LHPKIVLDTL 
RQESDDLHLE DLCKEGWGKT FCVESGGPEP GVGCTGRGVI TSIGLLEQLG AYDEKLQLDY
TFYDGLGSVV CGGFVMPMRE RKAQEVYIVT SGEIMAMYTT NNICRGIHKY TVIGGVRLGG
LICNSRNIEQ EDDLVKAFAE ELGTQMIAFI PRDKIVQQAE FYSQTVIEYA PHCEQAQHYR
NLAKAIDQNT NFVIPKPLSD EQLEELLVNS GVLSV