Gene Ava_4040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4040 
Symbol 
ID3682169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5025133 
End bp5026014 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content39% 
IMG OID637719392 
Producttungstate ABC transporter permease 
Protein accessionYP_324540 
Protein GI75910244 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2998] ABC-type tungstate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.570909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCAAA GAAGATTCGT AATTGCAGCT TTAGCTTCTT GTTTAGCAGT TGTAACTGCT 
GACATTGGTA ATTTTTTAAC ACCACAAGCC AACGCTCAAT CTCCTACAAA TCGCAATGTC
ATTGTCGCCA TGACAACTAG CATCGAAGAT AGCGGATTAC TTGATGATTT AGTTCCAGCA
TTTGAGAAAA CAACAGGCTA TCGACTCAAA AAAGTTGCCG TAGGAACTGG ACAAGCATTA
GCCTTAGCAG AAAAAGGCGA AGTTGACATG CTATTTGTCA ATTCACCCAA AGCCGAACGC
AAAGTTTTAC AAGGTGGTGC AGTGACTAAC CGCCGTTTAG TTATGCACAA TGACTTTGTA
ATTGTAGGGC CGGGTAATCC TGACAAAGCC AAGATTCGAG GTAGCAAAAA TGTTGTCCAA
GCGTTTAATG CAATTGCCAA AAATCAAGCA TTATTTGTAT CAAGAGGTGA TGATTCAGGG
ACGAATAAAT TAGAAAAAGA CTTATGGCAA CAAGCTAATA TTAACCCTGC TGGTAGTTGG
TATCAACAAA CAGGTTCAGG AATGGCGAGA ACTTTACAGG TTGCTAATCA AAAACTAGGA
TATACATTAG CAGATAGAGC CACCTATCTA TTTCAGAAAA AGAATCTTGA TTCTTTGCAG
GTGTTGGTAG AAGGAGACAG GAAATTATTA AATCTGTACC ATGTAATGCA AGTAAATCCG
CAGAAATTCC CCAGAGTTAA TAGTGCAGGA GCTAAGGCTT TTATTGATTT TGTTTTATCT
CCTGAAGGAC AGAGAATAAT TGCTGCTCAC GGTAGGAAAG AACTTGGACA GCCATTGTTT
TTTGCTGATG GGGGTAAGAG TGAAAAGGAT TATGGGTTTT AG
 
Protein sequence
MVQRRFVIAA LASCLAVVTA DIGNFLTPQA NAQSPTNRNV IVAMTTSIED SGLLDDLVPA 
FEKTTGYRLK KVAVGTGQAL ALAEKGEVDM LFVNSPKAER KVLQGGAVTN RRLVMHNDFV
IVGPGNPDKA KIRGSKNVVQ AFNAIAKNQA LFVSRGDDSG TNKLEKDLWQ QANINPAGSW
YQQTGSGMAR TLQVANQKLG YTLADRATYL FQKKNLDSLQ VLVEGDRKLL NLYHVMQVNP
QKFPRVNSAG AKAFIDFVLS PEGQRIIAAH GRKELGQPLF FADGGKSEKD YGF