Gene Ava_4037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4037 
Symbol 
ID3682166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5022502 
End bp5023104 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content43% 
IMG OID637719389 
ProductTetR family transcriptional regulator 
Protein accessionYP_324537 
Protein GI75910241 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.580741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAC TAAAAACAAA ACGTAAATCT GTCTACGATC GCATTTTGCA AACAGCATCA 
GATTTGTTTT ATCGGGAGGG TATTCGCAAT GTCGGTATTG ACAGAATCAT TGCGGAATCT
GGTGTAGCAA AAATGTCGCT GTACAATCAT TTCAAATCAA AAGATGCTTT GATTGAAGCT
TGGTTACGAC AAGAGGATGA AAAATGGTGT CGATGGCTAA AAACCACAGT TGAACAACAA
ACCTCTGAGC CTGCTAAACA ACTTTTGGCA ATCTTTGATG CTTTAAGAGA ATGGTTTGAA
AGCCCAGATT TTCGGGGTTG TGCATTTATT AACGCCTCCG TAGAATTAGC TAATCCTGAC
CATCCTGGGT ATCGAGTAGC ACTAGAACAT CAACACGCGA TTTACCACTA CATCAAAACT
CTCGCGCAAG CCGCAGCCCT GACATCACCA GAACAACTAG CCAGACAATT GCTTTTGCTT
GTACAAGGTG CGATCGTAGT TGCCATGATG GAAGGCAGTT GGTCAACCGC ATCCCAAGCG
AAGAAAGCGG CATTAATTCT CATTCAAACA GCATCAACAT CAACTCTGCG CCCCTCTGCG
TAA
 
Protein sequence
MTKLKTKRKS VYDRILQTAS DLFYREGIRN VGIDRIIAES GVAKMSLYNH FKSKDALIEA 
WLRQEDEKWC RWLKTTVEQQ TSEPAKQLLA IFDALREWFE SPDFRGCAFI NASVELANPD
HPGYRVALEH QHAIYHYIKT LAQAAALTSP EQLARQLLLL VQGAIVVAMM EGSWSTASQA
KKAALILIQT ASTSTLRPSA