Gene Ava_4034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4034 
Symbol 
ID3682163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5020078 
End bp5020464 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content41% 
IMG OID637719386 
ProductPilT protein-like 
Protein accessionYP_324534 
Protein GI75910238 
COG category[S] Function unknown 
COG ID[COG3744] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.507909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTTC TGCTCGATAC TCATACATTT ATCTGGTTTG TCACTGATAG TCCACAACTT 
AGCACTACTG CAAAGATACT GATTGAAGAT GAGTACAATG AGAAATGCTT AAGCTTTGCT
AGTGTTTGGG AAATGGCAAT CAAATGTAGT CTTGGCAAGT TGAGCTTCAA TTTACCACTT
CACACTTTTG TTGAACAACA GATACAGCAG AATAGTATTG ACTTACTCAG CATTCAAATG
CCCCATCTCG CAATTGTTGC CACCCTCCCG TTGCATCATC GTGATCCCTT CGACCGTTTG
TTAATTGCAC AGGCGATCGC AGAAGGGATT CCTATTATCA GTGCTGATGT TGCTTTTGAT
GCCTACTCAA TTAGGCGATT GTGGTAA
 
Protein sequence
MRFLLDTHTF IWFVTDSPQL STTAKILIED EYNEKCLSFA SVWEMAIKCS LGKLSFNLPL 
HTFVEQQIQQ NSIDLLSIQM PHLAIVATLP LHHRDPFDRL LIAQAIAEGI PIISADVAFD
AYSIRRLW