Gene Ava_4030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4030 
Symbol 
ID3682159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5017967 
End bp5018461 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content43% 
IMG OID637719382 
Producthypothetical protein 
Protein accessionYP_324530 
Protein GI75910234 
COG category[R] General function prediction only 
COG ID[COG2405] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.317302 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGTCA TTAGCGACAC ATCAGCAATC ACGAACTTGG CAGCAATAGA CCAGCTAAGG 
CTTCTGCCTC TTCTCTACAA GCAAGTCATA ATTCCAGAGG CAGTGTATCG TGAACTTGTA
GACATCGATC CGCCCGTACC AGGAACTGTG GAAGTCCAAA CAGCTACTTG GTTAGAAGTC
AAATTAATTG CTAACCGTGA ATTTGTGGAA CGGCTTCAAA GTGAGGTGAG ATTAGATCCT
GGGGAATCTG AAGCAATTAC CCTAGCTTTG GAACTTCAAG CAGATTTACT ACTAATTGAT
GAGCGTCGCG GTAGAGCAGA AGCCGACCGT TTAGGAATCA AAATTACTGG GCTACTGGGT
ATTTTGGTTG AGGCAAAACG AAAAAATTTA ATTTTAGCTG TGCAACCTCT GATGGATGCT
TTGATTGCTA CCTCAGAGTT TCGAGTATCT TCAGCCCTGT ACAACCAAAT TTTGATCATA
GTGAACGAAA CTTAG
 
Protein sequence
MIVISDTSAI TNLAAIDQLR LLPLLYKQVI IPEAVYRELV DIDPPVPGTV EVQTATWLEV 
KLIANREFVE RLQSEVRLDP GESEAITLAL ELQADLLLID ERRGRAEADR LGIKITGLLG
ILVEAKRKNL ILAVQPLMDA LIATSEFRVS SALYNQILII VNET