Gene Ava_4024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4024 
Symbol 
ID3681256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5008114 
End bp5008950 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content45% 
IMG OID637719376 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_324524 
Protein GI75910228 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGA TCACCCGTCG CCAATTTATC GCTACGGCTA CTTTAACAAC TGGCTTTGCT 
TTAGCCGTCA AACCAATTTC AGCCCAAGTG ATTACTACTG ATACACAAGG ATTAGTTGCA
GGTGCGGTGA AAATTCCCGT CCAAGATGGT GAAATTCCAG CTTACAGAGC ATTACCTGCT
ACTGGTGAGA ATTTTCCGAT TGTGTTGGTG ATTCAAGAAA TCTTCGGTGT ACATGAACAC
ATTCAAGATA TCTGTCGTCG TTTTGCCAAG TTGGGATATT TAGCGATCGC ACCAGAGTTA
TTTGCTCGTC AAGGTGATGT CTCGAAGTTA AGTAATATCG ATGAAATTCG CCAGGTGGTG
GCAAAAGTGC CAGATGCTCA GGTATTTTCT GATCTGGATG CTACCGTCGG TTGGGCTGTC
AAATCATCCA AGGGTAATGC TGATCAATTA GCCATTACAG GCTTTTGTTG GGGTGGTCGG
ATTACCTGGT TATACTCAGC ACACAACCCC AAAGTTAAGG CAGGTGTCGC TTGGTATGGT
CGATTGGTGG GCAATTCTAC AGAATTAACC CCGAAACATC CTGTAGATAT CGCCCCTAAT
TTGACAGTTC CAGTGCTGGG ATTGTATGGA GGAAAGGATA CAGGCATTCC ATTAGATACA
GTAGAGCAAA TGCGCGAGCG CTTAAAATCC AGCAGTAGTA AATCGGAAAT TGTTGTGTAT
CCTGATGCAC CCCACGCCTT TTTTGCCGAT TATCGTCCTT CTTACAGAGA AAAAGAAGCT
CAAGACGGCT GGAAACGCCT CCAAGCATGG TTTAAACAGT ATGGAGTTTC CAAGTAA
 
Protein sequence
MKQITRRQFI ATATLTTGFA LAVKPISAQV ITTDTQGLVA GAVKIPVQDG EIPAYRALPA 
TGENFPIVLV IQEIFGVHEH IQDICRRFAK LGYLAIAPEL FARQGDVSKL SNIDEIRQVV
AKVPDAQVFS DLDATVGWAV KSSKGNADQL AITGFCWGGR ITWLYSAHNP KVKAGVAWYG
RLVGNSTELT PKHPVDIAPN LTVPVLGLYG GKDTGIPLDT VEQMRERLKS SSSKSEIVVY
PDAPHAFFAD YRPSYREKEA QDGWKRLQAW FKQYGVSK