Gene Ava_4023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4023 
Symbol 
ID3681255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5007307 
End bp5008089 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content43% 
IMG OID637719375 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_324523 
Protein GI75910227 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.989231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGAAC TAACTCAGCA TCTATCAACC CCAGAGAGCC AAACCCAACA GATAATGACT 
GAAGTGCTGC AAATCGGCAA CCGTACTATT CAAGCTAGTG AACTCATTCC CTTACTGGCT
AATTATCAAC TTCTACCGCA ATTATTACGG GAGTTAATTA TCGATGAGGC AATAGCAGCA
GTAGAGTGTA AGCCTGAGGA GTTAGCCCAA GCTAAACAAA GGTTTTACGC CGATAAGCAG
TTAGCTCAAG AAACAGACAT TCAAGCATGG CTGGTACAAC AAGGTTTGAG TGCCGAACAA
CTAGACAATA TTATTGTTCG CAAAATCAAG CTAGAAAAGT ACAAGCAAGC CACATGGGGA
GCAAAACTGG AATCTTATTT TTTCCAGTTA AAAGCGAAAT TAGATAAAGT AATTTACTCT
CTACTGCGAA CTCAAGACCC AGGACTGGCA CAGGAACTCT ATTTTCGCCT ACAAGCAAAA
GAACAATCCT TCGCAGAAGT AGCACAAAAA TACTCCCAAG GCCCAGAATC TCAAACCGGT
GGATTAGTCG GGCCAGTGGA GCAGAGTTCA CTACATCCGG CAATGGTACA ACTACTTTCT
AATTGCCAAC CAGGACAAAT CTCATCTCCA TCTCGGATTG CTGAGTGGTA TGTCATTGTG
CGGGTGGAAA AGTTTATTCC CGCCCAATTA GATGAACCAA TGAAAGCACG CCTACTCAAT
GAATTATTTG AGGGTTGGAT GCAGGAAAAG CAAAGGCAAG TAAATATAAT TCCATCCGCT
TAA
 
Protein sequence
MRELTQHLST PESQTQQIMT EVLQIGNRTI QASELIPLLA NYQLLPQLLR ELIIDEAIAA 
VECKPEELAQ AKQRFYADKQ LAQETDIQAW LVQQGLSAEQ LDNIIVRKIK LEKYKQATWG
AKLESYFFQL KAKLDKVIYS LLRTQDPGLA QELYFRLQAK EQSFAEVAQK YSQGPESQTG
GLVGPVEQSS LHPAMVQLLS NCQPGQISSP SRIAEWYVIV RVEKFIPAQL DEPMKARLLN
ELFEGWMQEK QRQVNIIPSA