Gene Ava_4020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4020 
Symbol 
ID3681252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5003583 
End bp5003957 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content43% 
IMG OID637719372 
Productcytochrome c, class I 
Protein accessionYP_324520 
Protein GI75910224 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.442148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.970341 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATAACC AGATTACTAA ACCTGAAATT CTGATTCAGC GTATCGCTTT AGTGGCGCTA 
GTGATACTGC TAGCAATCCC TTTGGGCTTT TTTGGTGTTC AGTTGGTGAA AGCCTCTGAC
CCTTATGTTA AGAGTGTTCT TGCCATGAAA GGAGACCCAA TACAGGGACA CGCTATTTTT
CAAATAAATT GTGCTGGTTG TCATGGTTTA GAAGCCGATG GCCGAGTAGG CCCCAGCTTA
CAAGCAGTTT CTAAGCGTAA GTCCAAGTAT GGACTAATTC ACCAAGTTAT TAGCGGTGAT
ACACCACCAA TGCCAAAATT TCAGCCCAAC ACTCAAGAAA TGGCAGACCT TTTAAGCTTT
TTGGAGACTT TATAG
 
Protein sequence
MDNQITKPEI LIQRIALVAL VILLAIPLGF FGVQLVKASD PYVKSVLAMK GDPIQGHAIF 
QINCAGCHGL EADGRVGPSL QAVSKRKSKY GLIHQVISGD TPPMPKFQPN TQEMADLLSF
LETL