| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4018 |
|---|
| Symbol | |
|---|
| ID | 3681250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 5002532 |
|---|
| End bp | 5003086 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637719370 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_324518 |
|---|
| Protein GI | 75910222 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0742] N6-adenine-specific methylase |
|---|
| TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.737608 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTAA AAATTTACGG GAATCGCCAA ATTAAAACTT TACCAGGGCA AGAAACCAGA
CCCACCACTG GGAGGGTGAG GGAAGCTGTT TTTAATATTT GGCAGGGAGA AATAGAAGGG
TGTCGCTGGC TAGATTTGTG CGCCGGTAAC GGTTCAATGG GTGCAGAGGC TTTGTGTCGA
GGTGCTAGCT TGGTGGTCGG AATTGAAAAA TCAAGCCGAG CCTGTGCAAT TATCCAAGAA
AACTGGCAGC GCATAGCCAA TAACGAACAA AAATGGCGAG TATTGCGCGG AGATGTCCTT
CAGCAATTAA AAAACTTATC AGGGCAGCAA TTCGACAGAA TTTATTTTGA CCCACCCTAT
GCTAGTGGAT TATATCAGCC AGTGCTAGAG GCGATCGCTC TTTATCAATT ATTAGATCCA
AGTGGGGAAA TAGCGATCGA ACATAATCCC CAAGGATGGG TAGATATATT AATTCCTAAC
TGGGAAATTT GCCGCCAGAA AGTCTACGGT AACACGGCGC TTACTTTTTA TCGCAGCGAG
GAATTAGGGG GGTAG
|
|---|
| Protein sequence | MSLKIYGNRQ IKTLPGQETR PTTGRVREAV FNIWQGEIEG CRWLDLCAGN GSMGAEALCR
GASLVVGIEK SSRACAIIQE NWQRIANNEQ KWRVLRGDVL QQLKNLSGQQ FDRIYFDPPY
ASGLYQPVLE AIALYQLLDP SGEIAIEHNP QGWVDILIPN WEICRQKVYG NTALTFYRSE
ELGG
|
|---|
| |