Gene Ava_4016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4016 
Symbol 
ID3681248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5001241 
End bp5001753 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content35% 
IMG OID637719368 
Producthypothetical protein 
Protein accessionYP_324516 
Protein GI75910220 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.716552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA GAATTCTATT AACTTCTTTT GACACTTGGC TAGAAGATCA AAAGTCAAAT 
TCCTCTGATG ATTTATTATT TGAAGTCACT CAACTTAACT CACTTCCATT AGATTTACAA
TTTTTGCGCT TGTTACCTGT TGATATTGGG CTGGCCAGTT CCCTAGTAAT GGCAAAAATA
GAGGAATCCC AACCAGATTA CATTATCTGT TGTGGCATGG CCGCAAGCCG GAAAAAATTA
AGTGTAGAAG TAGGTGCTAG CTGTGGAGAA ATCTTTTTAC AGACCACAGT TGATCTAAAA
AAATTACTAA TAGGAGCAAC AGCAACTGAT ATTAGTGACG ACTGCGGTAA ATTTGTCTGC
GAGGGTCTTT ATTATTCCAT ACTGGACTAC TTAGAACAAA ATAAACTATC AGCTCATTGT
GTTTTTGTTC ATGTTCCCAT CTTGAATCAA GATAACTTGA TAGAAATTCT CACGGATTTC
GTATTAATTA TTAACAATCT GGCACTTTCA TGA
 
Protein sequence
MKKRILLTSF DTWLEDQKSN SSDDLLFEVT QLNSLPLDLQ FLRLLPVDIG LASSLVMAKI 
EESQPDYIIC CGMAASRKKL SVEVGASCGE IFLQTTVDLK KLLIGATATD ISDDCGKFVC
EGLYYSILDY LEQNKLSAHC VFVHVPILNQ DNLIEILTDF VLIINNLALS