| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4008 |
|---|
| Symbol | |
|---|
| ID | 3680479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 4991164 |
|---|
| End bp | 4992417 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637719360 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_324508 |
|---|
| Protein GI | 75910212 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.758896 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGGGA TAGTGCTTGA AAGCTACTCA GGATTGGTAA TTAAGAAAAT GATAAAATTT
AGAACTGCGA TATGTGCGAG TGTCATTTTA TTTGGAACTC AGCTTGATGT GGAACCGAGC
AAAGCTCTCC CTGCGTCACA TAAGGCAGGG ACTCCTCTAC CTAATCCAAC CGTGATATTA
GGATTTGGTG GAGTTTTGCA ACTGGACTGT ATTCGACAGG TTGAAGCGGG TGAATATCGC
TGTGCAAAGC GTTGGGCAGA AGTCACCCAT TTGCTCAAAT CATTAGTTTA TCAAGATGTT
GAATCGCAAC TTATTCCACC CCTGCAAAAT CAACTGGCGA TCGCAAATCA ATCCTGGCAT
CAGTTTCAAA CACAACACTG CCAACAGTTA ACTCAACGCT TACGCAATAC ACCAGATTTT
CCAATTGCAA CATCTGTCTG TTTAGCGCGA TTAAATAACG ATCGCATTCT AGAATTACAG
AGAGGTGTTA AAATCATAAC CTTCCAATCT CACGATCCTC GATTTGAATC CTTACTCGAT
CAACTCAAAT TGAGAAATTC ATCGGTGCAA CGCCACTGGG AGGAATATCA AACTCAGTAT
TGCCAAATTG AAAAAGCTCT ATTCTCCCTG AATACCCTGA GATTGGCGGA ATGTCATCAG
GGTCTGAGAC AGGCTCGACT TCACCAACTG GAAGAACTTT TGGCAGCACC TGCTCGTGGC
TTGGCTATCT TCAATAGTTC TGTACGACCT GGAATTCCAG AGCTAAATTG TGTGGATGAG
ACGCAGATCG GGTTAAATCA ATGCGCGGTC TATTGGTCAA AAACAACTCA GTTTTTGCAA
TCAAGCATTT ATGGCGATTG GGCAGAAAGA CTATCGAAGC AGTATCAGCC AACATTTGGG
ATCGCACAGA AATACTGGCA AGACTATCGT GAAGCACATT GTACTGAGTT GGTTGAACCT
TTTCAGGAAG GTTCTATGGC ACCGATGCTC TATCATCGCT GTTTAGCTCG GCTAAATAAC
GATCGCATTG CGGATCTAAA GGGGATAGCT GTATACGATT CAGAAGACGA GGCGCAGCAA
GCCCCAGTTA CATCTGGGCA AGATACCACT CAAGCTCTGT GGGAGCGTTA TCAAACTGAG
TACTGCAAGT TTGAGTCACT GTTTTTTGGT AGTCAAACCA GAAGCAAGCA ATGCCCAAAT
CGTTTAAATC TGGGGCGTTT GCGCCATATC AAAGCAATGA TAAATACTCG TTAA
|
|---|
| Protein sequence | MPGIVLESYS GLVIKKMIKF RTAICASVIL FGTQLDVEPS KALPASHKAG TPLPNPTVIL
GFGGVLQLDC IRQVEAGEYR CAKRWAEVTH LLKSLVYQDV ESQLIPPLQN QLAIANQSWH
QFQTQHCQQL TQRLRNTPDF PIATSVCLAR LNNDRILELQ RGVKIITFQS HDPRFESLLD
QLKLRNSSVQ RHWEEYQTQY CQIEKALFSL NTLRLAECHQ GLRQARLHQL EELLAAPARG
LAIFNSSVRP GIPELNCVDE TQIGLNQCAV YWSKTTQFLQ SSIYGDWAER LSKQYQPTFG
IAQKYWQDYR EAHCTELVEP FQEGSMAPML YHRCLARLNN DRIADLKGIA VYDSEDEAQQ
APVTSGQDTT QALWERYQTE YCKFESLFFG SQTRSKQCPN RLNLGRLRHI KAMINTR
|
|---|
| |