Gene Ava_4002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4002 
Symbol 
ID3680473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4984945 
End bp4985391 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content35% 
IMG OID637719354 
Producthypothetical protein 
Protein accessionYP_324502 
Protein GI75910206 
COG category[S] Function unknown 
COG ID[COG4803] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.945444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAT TAGTTGTAGT CAACTTTGAT GACAAATACA AAGCAGATGC AGTGCTTCTA 
GAACTGCTAA AACTTGAACA AGAGTATTTA GCTGACTTGG AAGATGCAGT TATTATCACC
AAAAATGCAC AGGGTAAGAT TAGGGTTAAA CCGTATCATG ATTTAGTTAA ACCCGGTGAT
CTGAGCAATG AACTTTGGGG TGGAATCATT AGCTCCACTT TCTTTCACCG CTTTCTGACA
ATTAAAGAGA GCGTGTTTGA TAGTAATTTC TTAACCGAAG TTGAAGAATC TTTAAAGCCA
AATTCTTCAT CTTTATTTGT CCTGATTAAT TATGCTCACC CAGAGAAAAT AATTGCGGAA
TTTCATCGGT TTGAAGGAAA GTTAATTAGA ACAACTCTGT CTAAACACCA AATAGATAAT
CTACAAAAAA CTTACCAAAA AGCCTAA
 
Protein sequence
MSELVVVNFD DKYKADAVLL ELLKLEQEYL ADLEDAVIIT KNAQGKIRVK PYHDLVKPGD 
LSNELWGGII SSTFFHRFLT IKESVFDSNF LTEVEESLKP NSSSLFVLIN YAHPEKIIAE
FHRFEGKLIR TTLSKHQIDN LQKTYQKA