Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4000 |
Symbol | |
ID | 3680471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4983460 |
End bp | 4984305 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637719352 |
Product | DNA/RNA non-specific endonuclease |
Protein accession | YP_324500 |
Protein GI | 75910204 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1864] DNA/RNA endonuclease G, NUC1 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAGT CTAAATTTTC TAAGACTATT CTACTTATTG CCTTACCAGC AATATCATTA ATCCTGCTTA GTTATCTACA AAATCCCTTA ACTGCCCAAA CCTCAAGTGT TCATTTAACG ATGGGCAATC CTAGTGGGGC TAATACTAGT TACAGTAATC TTTTATTAAG CAAACCTCAA TATGCAGTTT CTTACAATTG CTATAGAGGG ACACCAAATT GGGTAAGTTG GCAGTTAAAT ACATCATGGC TCGGAAGTGC GCCTCGCCAA GATGATTTTC GTGCAGATAC TACATTACCT TCAGGCTGCT ACCGAGTTAC TTCCTCTGAT TACAGTGGTA GTGGCTTTGA CCGTGGTCAC ATGACTCCTT CAGCAGATAG AACAAATACA ATTGCAAATA ACTCTGCTAC TTTTTTGATG ACAAATATGA TACCCCAAGC ACCTGATAAT AATCAGGGAG TATGGGCAAA TCTAGAAAAT TATTGTCGAG ATTTAGTGGT CAATCAAGGT AAAGAACTCT ATATTATTTC TGGTTCCTAT GGCACTGGTG GAACCGGGTC GAATGGAACC TTCAGCACTA TTGCTGGTGG TAAAGTTACA GTCCCAGCTA GAACTTGGAA AGTTATTGTA GTCCTAAATA GACCAAATTC TGGTGCTGCC AGCGTAACGA CTAGCACAAG AGTAATTGCT GTAAACATAC CTAATACACA AGGTGTTAGA TATGCAAATT GGAGAGACTA CAGAGTTAGT GTTGACTCTA TCGAAGTAAA CACTGGTTAC GATTTGCTCT CTAATGTCTC TACAACTACT CAATCTGTAA TTGAGGCTAG AGTTGACAAT TTGTAA
|
Protein sequence | MKKSKFSKTI LLIALPAISL ILLSYLQNPL TAQTSSVHLT MGNPSGANTS YSNLLLSKPQ YAVSYNCYRG TPNWVSWQLN TSWLGSAPRQ DDFRADTTLP SGCYRVTSSD YSGSGFDRGH MTPSADRTNT IANNSATFLM TNMIPQAPDN NQGVWANLEN YCRDLVVNQG KELYIISGSY GTGGTGSNGT FSTIAGGKVT VPARTWKVIV VLNRPNSGAA SVTTSTRVIA VNIPNTQGVR YANWRDYRVS VDSIEVNTGY DLLSNVSTTT QSVIEARVDN L
|
| |