Gene Ava_4000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4000 
Symbol 
ID3680471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4983460 
End bp4984305 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content39% 
IMG OID637719352 
ProductDNA/RNA non-specific endonuclease 
Protein accessionYP_324500 
Protein GI75910204 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1864] DNA/RNA endonuclease G, NUC1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGT CTAAATTTTC TAAGACTATT CTACTTATTG CCTTACCAGC AATATCATTA 
ATCCTGCTTA GTTATCTACA AAATCCCTTA ACTGCCCAAA CCTCAAGTGT TCATTTAACG
ATGGGCAATC CTAGTGGGGC TAATACTAGT TACAGTAATC TTTTATTAAG CAAACCTCAA
TATGCAGTTT CTTACAATTG CTATAGAGGG ACACCAAATT GGGTAAGTTG GCAGTTAAAT
ACATCATGGC TCGGAAGTGC GCCTCGCCAA GATGATTTTC GTGCAGATAC TACATTACCT
TCAGGCTGCT ACCGAGTTAC TTCCTCTGAT TACAGTGGTA GTGGCTTTGA CCGTGGTCAC
ATGACTCCTT CAGCAGATAG AACAAATACA ATTGCAAATA ACTCTGCTAC TTTTTTGATG
ACAAATATGA TACCCCAAGC ACCTGATAAT AATCAGGGAG TATGGGCAAA TCTAGAAAAT
TATTGTCGAG ATTTAGTGGT CAATCAAGGT AAAGAACTCT ATATTATTTC TGGTTCCTAT
GGCACTGGTG GAACCGGGTC GAATGGAACC TTCAGCACTA TTGCTGGTGG TAAAGTTACA
GTCCCAGCTA GAACTTGGAA AGTTATTGTA GTCCTAAATA GACCAAATTC TGGTGCTGCC
AGCGTAACGA CTAGCACAAG AGTAATTGCT GTAAACATAC CTAATACACA AGGTGTTAGA
TATGCAAATT GGAGAGACTA CAGAGTTAGT GTTGACTCTA TCGAAGTAAA CACTGGTTAC
GATTTGCTCT CTAATGTCTC TACAACTACT CAATCTGTAA TTGAGGCTAG AGTTGACAAT
TTGTAA
 
Protein sequence
MKKSKFSKTI LLIALPAISL ILLSYLQNPL TAQTSSVHLT MGNPSGANTS YSNLLLSKPQ 
YAVSYNCYRG TPNWVSWQLN TSWLGSAPRQ DDFRADTTLP SGCYRVTSSD YSGSGFDRGH
MTPSADRTNT IANNSATFLM TNMIPQAPDN NQGVWANLEN YCRDLVVNQG KELYIISGSY
GTGGTGSNGT FSTIAGGKVT VPARTWKVIV VLNRPNSGAA SVTTSTRVIA VNIPNTQGVR
YANWRDYRVS VDSIEVNTGY DLLSNVSTTT QSVIEARVDN L