| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3995 |
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| Symbol | |
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| ID | 3680466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 4967923 |
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| End bp | 4973307 |
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| Gene Length | 5385 bp |
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| Protein Length | 1794 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637719347 |
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| Product | Serine/threonine protein kinase and Signal transduction histidine kinase (STHK) with GAF sensor |
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| Protein accession | YP_324495 |
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| Protein GI | 75910199 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG0642] Signal transduction histidine kinase
[COG3899] Predicted ATPase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCTA CAGTACCTCA ATTCCCGGAA ATTTCTGGCT ACACCATCAC TGAACAAATT
TACCGGGGTT CACGTACTGC CGTGTATTTA GCGATACAAG ATAATCAGAG ATTACCTGTT
GTCATTAAGG TGCTGCAACG AGAGTATGCC ACATTTGGGG AATTGGTACA GTTTCGCAAT
CAGTATGCGA TCGCCAAAAA TCTGCCCATT ACCGGCATTA TCCCACCCCT AAGTCTAGAA
CCATTTGGTA ATGGCTATGC CTTAGTCATG GCAGACTGGG GGGGTATCTC CCTGGAAACA
TATATCCAGC AACAGCCCTT AGACTTAGGA GACATTTTGG TAGTTGCCAT CCAACTGGCA
GATATTCTCC ACGAACTACA ACAACATCGA GTTATCCACA AAGACATTAA ACCTGCCAAC
ATCCTCATTC ATCCAGAATC CCAGCAAGTT AAACTGATAG ACTTTAGCAT TGCTTCGGTA
TTGCCCAAAG AAACCCAGGA AATCCAAAAC CCCAACACCC TGGAAGGTAC TTTAGCTTAT
CTTTCCCCTG AACAAACGGG AAGAATGAAT CGCGGCATCG ATTATCGCAG TGATTTTTAT
GCCCTTGGTG TTACTCTGTA TCAATTGCTA ACAGGTCGCT TACCCTTCCT TACGGACGAC
CCCTTAGAAT TGGTGCATTG TCACATCGCT AAGATTGCCA CACCTGTCCA TCTAGTAAAT
ACCGATGTGC CGCCAACCTT GGGGGCAATT GTCGCCAAAC TCATGGCCAA AAATGCCGAA
GACCGCTATC AAAGTGCCTT GGGACTCAAG CATGATTTAG ATGAATGTTG GAGTCAATGG
AAACAAACAG GGTCAATTGC GGAATTTGAG TTGGGACAGA AGGATTTATG CGATCGCTTT
CTCATTCCTG AAAAACTCTA CGGTAGGGAA ACTGAAGTCC AAACCCTGCT AGATGCTTTT
GAGCGGGTTG CCCAAGGGTC ATCAGAAATG ATGCTGGTGG CTGGTTTTTC GGGCATTGGT
AAAACAGCCG TTGTCAATGA AGTACATAAG CCTATTGTCA AGCAACGAGG TTACTTCATC
AAAGGCAAGT TTGACCAGTT TAATCGCAAC ATTCCCTTCT CTGCCTTTGT GCAAGGCTTT
CAAGACTTAG TTGGGCAACT TTTGAGTGAA AGCGATACCC AATTGCAACA CTGGAAAACT
CAGATTCTCT CAACATTGGG AGAAAATGCC CAAGTGATTG TTGAACTGAT TCCTGAACTG
GAGCGGATTA TTGGGGTGCA ACCCCCAACA CGCGAATTAT CAGGAACCGC AGCCCAAAAT
CGGTTTAATT TGTTGTTTCA AAGGTTCATT CAAGTTTTTA CCACCCCTGC ACACCCGTTG
GTAATGTTTG TGGATGATTT ACAGTGGGCA GATTCGGCTT CGCTGAATTT GATTCAGGTG
TTAATGTCTG AGTCTCAAAC GGGCTGTTTA TTACTGTTAG GGGCGTATCG GGATAATGAG
GTCTTTGCCG CTCACCCATT AATGTTGACC CTCAATGGTA TGGAAAAAGC TGGGGCAAAA
ATCCACACCA TCACTTTGCA ACCCCTAAGT TTTACAAGTC TCAATCACCT GATTGCAGAT
ACCCTTCATA CTCATGCACT CGTGGTACAA CCTCTGACAA AACTGGTAAT GCAGAAAACC
CTGGGTAATC CTTTCTTTGC TACCCAGTTT CTCAAGGCAT TACATCAAGA CCAGTTAATT
ACTTTTGACC CGAATGCAGG ACATTGGCAG TGTGATATTG TGCAAGTGCG AGATGTGGCT
TTGACCGATG ATGTGCTGGA ATTGATGGTG CAGCAATTGC AAAAAATGCC AGAAGCAACG
CAAGAGATTT TAAAACTTGC GGCTTGTATT GGCGCACAGT TCGATTTAAC CACACTAGCG
ATCGTTTCAC AGCAATCTCA AACAGAAGTG GCAACGATAC TTTGGAAAGC GTTACAGGAA
GGGTTGATTT TGCCACAAAG CGATTTGTAC AAATTCTATT TGGGAGAATC GCAAGCAATA
CAGCACACCC CACAGGAAAC CCTCAACTAT CGTTTTCTGC ATGATCGCGT CCAACAAGCT
GCTTATTCTC TGATTCTTGA TGACCAAAAA CAGGTGACAC ACCTCACTAT TGGAAAATTG
CTATTAGAAA ATAGTAATCC CTCTTTCCAA GATAGTCATT TATTTGCAAT TGTTCATCAG
TTAAATTGTG GCATTTCCAT GATTACAGAG TTGGAACAAC GTTATCAATA TGCTCAATTA
AATTTACAAG CAGGTTATAA GGCTAAAGAC TCTACTGCAT ATAATGCAGC CTTACATTAT
TTCGACAAGG GAATGCAATT TCTGCCGACG GATAGCTGGG ATAAAAATTA TAATTTGACA
CTTCTTATAT ATGAATCAGC AGCAGAAGTG GCATTGCTTA GCTGTGATTT TAAGCAGATG
GATACCTTAA TTCAAATAGT TCTAAAAAAC ACAAATGACC TGTTGGAACA AGTCAAAGTT
TATGAAATAA AACTTCAAGC TTATCAAGTA CAAAATCAGC AGCTTCAAGC GATAAAAATT
GGACGGGAAA TCCTGCAAAA GCTAGGAGTT ATCCTGCCAG AATCTATAAC ACTTTCAGAT
ATCCAACGAC AGGTACAACA CACACTAACT AAGCTATCGA ACTACTCCCT GGAGGACTTA
ATCAATTTAC CCATTACCCA GGATGCCACT GCTACGGCGG CAGCGCGCAT CATGACGAGT
TTAGTCCCTT CGATTCATCA GGCTAATCCC CTTTTATTTC CAGTTGTTGC CTGCGAAGAG
GTTAATCTAT CCCTGCAATA CGGGAACTCG CTTTTCTCAG CACCGGGATA TGCAGATTTT
AGTATTATTG TTAGCTCTGT GTTGAATGAA ATAGAAGTAG GTTATCGTTT TGGACAACTT
GCACTCCAGT TAATGGAGAA ATTTAATGAA AGTTATGTTC AAAGCATCGT TATGTTTAAA
GTTGCCGCAT TTAATCAATC TAATCAACAA GATATCCGGA ACGCAATTTT TTTATTAAAT
AAATCCTATA AAGTTGCCAT AGAAACAGGC GATTCTGTTC ACGCACTTGT CTCGACTTCA
TTTAGATTGT TCTACTCATA TTTGAGTGGG GACAAACCTT TACCAGAGTT ATTAGAAGAG
GTTGAAATTT ACCAATCGAA ATTCGCAACG AGTGAACATT TTCTGACTTG GGTGCATATT
ATTAGCTCAT CTATTCATAA TTTTATTGAG TTAAGTGACA ATCCAGACTG TCTAGGGTCT
ATTGATGCTG AGAATGAAAA ATTATCTACT CTAATTCAAG AAAATGATGA GCTAGCTCTG
CATCTATTTT ACTTGAGTAA ATTAATACTT AGTTATTCAT TTAGTTGTTT TGAAACTGCG
ATTCAGATAG CAGATCGAGG ACTTCAATAT CTCAAGGCTG GTATTAGTAT GCCATCGGCA
CCAGCTTACT ACTACTACGA TTCATTAACC CGGTTAAAAT TATATTTCAA TTTTCAGCCT
TCATCTCAGA AGGAGGTTTT AAGGAAAGTT GATTCTAACC AGAAACACCT CTTGGTTTAC
GTGAATGCTG CTCCCATGAA TTATCAACAC AAATATCACT TGGTAGAAGC AGTGCGTTTC
CAGAGGTTGG GTAAACAAGC GGAGGCTATA GAATTTTTTG ATTGCGCCAT TGCGGGGGCA
AAAGCCAACA GATTCATCCA AGACGAAGCC CTTGCCAACG AACTAGCTGC CGAATTTTAT
CTCAATTGGG GTAAAGATAA ATTTGCCGCA GGCTATATAC AAGAAGCTTA CTATTGTTAC
AGTCGCTGGG GTGCTAAAGC CAAAGTTACC GACTTGGAAA CCCGCTATCC TGAATTGCTG
CGCCCCATTC TGCAACAAAC AATGACATCG ACTGATGCGT TGACCACACT AATGACTATT
GCTGCACCTG CGGTATCAGT TCATTATGAC ACTCATCACA CTTCTAGTAG TACTGGCGTT
AATCAAGTTC TCGATTTTGC GGCTATCCTC AAAGCTTCTC AAGTCCTCTC TAGAACCATT
CAACTGGATC AGCTACTACA AAAACTCACC CAAATTATTT TGCACAACTC AGGAGGCGAT
CGCTGTGCGC TGTTGTTTCC CAACGAAACC GGAGAATGGC AAGTAAGGGC GATCGCCACA
CCTGATGATG TACAACTAAT CGCGGAACCT TTTACCAATA ATCCCAATAT TCCGGTCAAA
TTAATTCAGT ATGTTAAAAA TAATCAAGAA ACTGTGGTAA TTGATGACCT AAAAACCGAT
TTACCTGTAA TTGATGACTA CCTCAGGCAA CGCCAACCAA AGAGTATTCT GTGTCTACCA
CTGCTTAATC AAGGTCATCT GATTGGGATT TTATACCTGA AAAATCGCCT TACCAGAGGT
GTTTTCACCA GCGATCGCCT CCTAATTCTT AACTTCCTCT GCATCCAAGC TGCCATTTCC
CTAGAAAATG CCCGCCTTTA TCAACAAGCA CAAACCTACG CCCGACAACT TGAGCAATCC
CAGTTGCAAA TGATACAAAG CGAAAAAATG GCATCCCTGG GAAATCTAGT AGCTGGGGTT
GCCCATGAAA TCAACAACCC CATTGGTTTC CTCAATGGCA GTATCAAAAA CGGCAAAGAA
TATGTGCAAG ATTTACTGGG ACATTTAGCT CTTTATCAAC AGCACTATCC CAACCCAGTT
GAGGCAATTC AAGACAATGC CAAAGATATC GACTGGGAAT TTCTCTCGGA AGATTTACCA
AAGTTACTCG ATTCGATGGA AGGAGCAACG AATCGCATCA ACAGTATCAG TAATAGTCTC
CGTACCTTCT CCCGTGCTGA TACCGAATAC AAAATCAGTG CCAATCTTCA TGAAGGACTT
GATAGCACGT TGTTAATTTT GAAATATCGC CTCAAAGCTA ACGAACATCG CCCAGCGATT
CAAGTCATAC AAGACTTGGG AGATTTACCC ACAATCAAAT GCTTCCCTGG ACAGTTAAAC
CAAGTATTTA TGAATATCTT GGCGAATGCC ATTGATATGT TTGACGAAAT GGCGCAAACT
CGATTATTCA AAGAACTGGA AGCCAATCCC CAAAAAATTA CCATTCGCAC TGAAGTTATA
TCAAACCAGG TGTATATCCG TATTCGTGAT AATGGCAAAG GTATCACACA AGAGCTACAA
GAGAAAATAT TTGACCATTT ATTTACTACC AAAGCTGTGG GGAAAGGTAC GGGATTGGGA
TTGGCGATCG CCCGTCAAAT TGTGGTAGAA AAACATGGTG GTAGCTTAAA TGTATGGTCT
GAGCTAGGTC AAGGAACTGA GTTTACAGTA CAAATTCCAG TGTAA
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| Protein sequence | MTSTVPQFPE ISGYTITEQI YRGSRTAVYL AIQDNQRLPV VIKVLQREYA TFGELVQFRN
QYAIAKNLPI TGIIPPLSLE PFGNGYALVM ADWGGISLET YIQQQPLDLG DILVVAIQLA
DILHELQQHR VIHKDIKPAN ILIHPESQQV KLIDFSIASV LPKETQEIQN PNTLEGTLAY
LSPEQTGRMN RGIDYRSDFY ALGVTLYQLL TGRLPFLTDD PLELVHCHIA KIATPVHLVN
TDVPPTLGAI VAKLMAKNAE DRYQSALGLK HDLDECWSQW KQTGSIAEFE LGQKDLCDRF
LIPEKLYGRE TEVQTLLDAF ERVAQGSSEM MLVAGFSGIG KTAVVNEVHK PIVKQRGYFI
KGKFDQFNRN IPFSAFVQGF QDLVGQLLSE SDTQLQHWKT QILSTLGENA QVIVELIPEL
ERIIGVQPPT RELSGTAAQN RFNLLFQRFI QVFTTPAHPL VMFVDDLQWA DSASLNLIQV
LMSESQTGCL LLLGAYRDNE VFAAHPLMLT LNGMEKAGAK IHTITLQPLS FTSLNHLIAD
TLHTHALVVQ PLTKLVMQKT LGNPFFATQF LKALHQDQLI TFDPNAGHWQ CDIVQVRDVA
LTDDVLELMV QQLQKMPEAT QEILKLAACI GAQFDLTTLA IVSQQSQTEV ATILWKALQE
GLILPQSDLY KFYLGESQAI QHTPQETLNY RFLHDRVQQA AYSLILDDQK QVTHLTIGKL
LLENSNPSFQ DSHLFAIVHQ LNCGISMITE LEQRYQYAQL NLQAGYKAKD STAYNAALHY
FDKGMQFLPT DSWDKNYNLT LLIYESAAEV ALLSCDFKQM DTLIQIVLKN TNDLLEQVKV
YEIKLQAYQV QNQQLQAIKI GREILQKLGV ILPESITLSD IQRQVQHTLT KLSNYSLEDL
INLPITQDAT ATAAARIMTS LVPSIHQANP LLFPVVACEE VNLSLQYGNS LFSAPGYADF
SIIVSSVLNE IEVGYRFGQL ALQLMEKFNE SYVQSIVMFK VAAFNQSNQQ DIRNAIFLLN
KSYKVAIETG DSVHALVSTS FRLFYSYLSG DKPLPELLEE VEIYQSKFAT SEHFLTWVHI
ISSSIHNFIE LSDNPDCLGS IDAENEKLST LIQENDELAL HLFYLSKLIL SYSFSCFETA
IQIADRGLQY LKAGISMPSA PAYYYYDSLT RLKLYFNFQP SSQKEVLRKV DSNQKHLLVY
VNAAPMNYQH KYHLVEAVRF QRLGKQAEAI EFFDCAIAGA KANRFIQDEA LANELAAEFY
LNWGKDKFAA GYIQEAYYCY SRWGAKAKVT DLETRYPELL RPILQQTMTS TDALTTLMTI
AAPAVSVHYD THHTSSSTGV NQVLDFAAIL KASQVLSRTI QLDQLLQKLT QIILHNSGGD
RCALLFPNET GEWQVRAIAT PDDVQLIAEP FTNNPNIPVK LIQYVKNNQE TVVIDDLKTD
LPVIDDYLRQ RQPKSILCLP LLNQGHLIGI LYLKNRLTRG VFTSDRLLIL NFLCIQAAIS
LENARLYQQA QTYARQLEQS QLQMIQSEKM ASLGNLVAGV AHEINNPIGF LNGSIKNGKE
YVQDLLGHLA LYQQHYPNPV EAIQDNAKDI DWEFLSEDLP KLLDSMEGAT NRINSISNSL
RTFSRADTEY KISANLHEGL DSTLLILKYR LKANEHRPAI QVIQDLGDLP TIKCFPGQLN
QVFMNILANA IDMFDEMAQT RLFKELEANP QKITIRTEVI SNQVYIRIRD NGKGITQELQ
EKIFDHLFTT KAVGKGTGLG LAIARQIVVE KHGGSLNVWS ELGQGTEFTV QIPV
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