Gene Ava_3990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3990 
Symbol 
ID3680461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4962468 
End bp4963244 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content41% 
IMG OID637719342 
Productthioesterase 
Protein accessionYP_324490 
Protein GI75910194 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3208] Predicted thioesterase involved in non-ribosomal peptide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAA GACTAATAGT TGATCCTTGG ATTAGCTGCC CTCAGCCTAA TCCAAAGGCC 
CAACTTCGCT TATTCTGTTT TCCATGTGCA GGGGGTACAA CTTCAACATA TAGTACCTGG
ACAAACAAAT TACCAAAGGA CGTAGAGGTT CACTTAGTTC AACTTCCTGG AAGAGGACGG
CGATTGCAAG AACCCTCATA TACCAATTTT TTACCTCTTG TTCAAACTTT GGCATCAAAC
ATTAGACCGT ATCTGAATAT GCCATTTGCT TTTTTTGGCC ATAGCATGGG TGCAACACTT
AGCTTTGAGA TAGCGCGTCT ACTCCGTCAA GAGTATAATC TTCGCCCTGT TCATTTATTT
GCTGCTTGTT GCCCTGCTCC TCAAAAACCA ATACTCAAAC CGTTTATTCA CAAAATGCCT
GAGACTGAAT TCCTGGCGGA ACTTTGCGAT CGTTACAATG CAATTCCCAA GGCGATTTTG
CAGAATGAAC AAATGTTACA ACTTTTCTTA CCTTGTCTGC GAGCGGACTT TACGATACTA
GAGACATACA TTTACAAAAG TGAAATGCCC CTCGAATGCC CAATCTCTGT ATTTGGAGGT
TTGCAGGATA AAGCAATTAA GGTTGATGCT TTAGAAGCTT GGCGTGAGCA GACTAGTAGT
TACTTCAACC TGCAAATGTT TCCTGGAGAA CATTTCTTTT TACACAATTC ACAATCACTC
TTTTTGCAGT CATTATCCCA ACATTTAGAT TACCTGTTAG CTATCAACAA CAATTAA
 
Protein sequence
MTARLIVDPW ISCPQPNPKA QLRLFCFPCA GGTTSTYSTW TNKLPKDVEV HLVQLPGRGR 
RLQEPSYTNF LPLVQTLASN IRPYLNMPFA FFGHSMGATL SFEIARLLRQ EYNLRPVHLF
AACCPAPQKP ILKPFIHKMP ETEFLAELCD RYNAIPKAIL QNEQMLQLFL PCLRADFTIL
ETYIYKSEMP LECPISVFGG LQDKAIKVDA LEAWREQTSS YFNLQMFPGE HFFLHNSQSL
FLQSLSQHLD YLLAINNN