Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3990 |
Symbol | |
ID | 3680461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4962468 |
End bp | 4963244 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637719342 |
Product | thioesterase |
Protein accession | YP_324490 |
Protein GI | 75910194 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3208] Predicted thioesterase involved in non-ribosomal peptide biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCAA GACTAATAGT TGATCCTTGG ATTAGCTGCC CTCAGCCTAA TCCAAAGGCC CAACTTCGCT TATTCTGTTT TCCATGTGCA GGGGGTACAA CTTCAACATA TAGTACCTGG ACAAACAAAT TACCAAAGGA CGTAGAGGTT CACTTAGTTC AACTTCCTGG AAGAGGACGG CGATTGCAAG AACCCTCATA TACCAATTTT TTACCTCTTG TTCAAACTTT GGCATCAAAC ATTAGACCGT ATCTGAATAT GCCATTTGCT TTTTTTGGCC ATAGCATGGG TGCAACACTT AGCTTTGAGA TAGCGCGTCT ACTCCGTCAA GAGTATAATC TTCGCCCTGT TCATTTATTT GCTGCTTGTT GCCCTGCTCC TCAAAAACCA ATACTCAAAC CGTTTATTCA CAAAATGCCT GAGACTGAAT TCCTGGCGGA ACTTTGCGAT CGTTACAATG CAATTCCCAA GGCGATTTTG CAGAATGAAC AAATGTTACA ACTTTTCTTA CCTTGTCTGC GAGCGGACTT TACGATACTA GAGACATACA TTTACAAAAG TGAAATGCCC CTCGAATGCC CAATCTCTGT ATTTGGAGGT TTGCAGGATA AAGCAATTAA GGTTGATGCT TTAGAAGCTT GGCGTGAGCA GACTAGTAGT TACTTCAACC TGCAAATGTT TCCTGGAGAA CATTTCTTTT TACACAATTC ACAATCACTC TTTTTGCAGT CATTATCCCA ACATTTAGAT TACCTGTTAG CTATCAACAA CAATTAA
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Protein sequence | MTARLIVDPW ISCPQPNPKA QLRLFCFPCA GGTTSTYSTW TNKLPKDVEV HLVQLPGRGR RLQEPSYTNF LPLVQTLASN IRPYLNMPFA FFGHSMGATL SFEIARLLRQ EYNLRPVHLF AACCPAPQKP ILKPFIHKMP ETEFLAELCD RYNAIPKAIL QNEQMLQLFL PCLRADFTIL ETYIYKSEMP LECPISVFGG LQDKAIKVDA LEAWREQTSS YFNLQMFPGE HFFLHNSQSL FLQSLSQHLD YLLAINNN
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