| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3970 |
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| Symbol | |
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| ID | 3679644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 4920625 |
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| End bp | 4921395 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637719322 |
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| Product | Short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_324470 |
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| Protein GI | 75910174 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000119913 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00103281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCTTTTA TTGATGAAAT TAATCGCGCC AATGTCCTGA TTGTAGGAGC TAGCCAAGGC
ATTGGCTTAG GCTTTGTCAA AAAATTGCTG CAAGATGACA GAATCGCCAA AATTTATGCC
ACCTATCGCC AAAAAGATTC CGCGTCTGAG TTAATTACAC TAGAAAAAGA ATATTCCCCA
AGATTAACTT GTCTATCACT AGATATTACT GATGAGTTAC AGATAGCGGA AATCTTGCAA
CAAATAAATA CTGAAACTAA TAGATTGCAT TTGGTAATTA ACTGTGTAGG AATACTACAT
GAAGGAAATT TACAACCTGA AAAAAGTTTG AGACAACTTA ATTCAGAAAA TTTACTCCGT
TACTTTCACA TTAACAGCAT AGGTGCTGTT CTCCTAGCAA AACATCTTTT ACCTTGCTTC
CAACATAATG AGCCAAGTGT TTTTGCTAGT ATTTCCGCTA AATTGGGCAG CATCGGCGAT
AATCAACTTG GTGGCTGGTA CGGCTATCGC GCCTCCAAAG CGGCACTCAA TATGTTTATG
CGAACTGTAG CCGTTGAGTA TGGTAGAAGT TGCCCTAAAA CTACAGTAGT AACTTTACAT
CCTGGGACAA CCGATACACG TCTTTCTCGA CCCTTTCAGA AAAATGTAGC CGCCGAAAAA
CTATTTTCTA TTGAACGCAC TGTTGACCAA TTATTAGCCG TGATTGCACA ACTCCAGAAA
GGTGATAGTG GAAAGTTTTT CTCTTGGGAT GGTACTCAGC TGCCTTGGTA A
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| Protein sequence | MSFIDEINRA NVLIVGASQG IGLGFVKKLL QDDRIAKIYA TYRQKDSASE LITLEKEYSP
RLTCLSLDIT DELQIAEILQ QINTETNRLH LVINCVGILH EGNLQPEKSL RQLNSENLLR
YFHINSIGAV LLAKHLLPCF QHNEPSVFAS ISAKLGSIGD NQLGGWYGYR ASKAALNMFM
RTVAVEYGRS CPKTTVVTLH PGTTDTRLSR PFQKNVAAEK LFSIERTVDQ LLAVIAQLQK
GDSGKFFSWD GTQLPW
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