| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3967 |
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| Symbol | |
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| ID | 3682564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 4916239 |
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| End bp | 4917642 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637719319 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_324467 |
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| Protein GI | 75910171 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.177679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0198383 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAG GCACCCTGTT TGATAAAGTT TGGGACTTAC ACACTGTTGG TACACTTCCT
TCAGGGCTAA CACAGCTATT TATTGGCCTG CACCTAGTCC ATGAAGTTAC TAGTCCACAA
GCCTTTGCTA TGTTACGGGA ACGAGGTTTA AAGGTACTAT TTCCTGAGCG GACTGTGGCT
ACTGTGGATC ACATCGTGCC TACAGAGAAT CAGGCGCGTC CTTTTGTCGA TCGCTTGGCT
GAGGAAATGA TCCAAGCCCT AGAGCAGAAT TGTCAAGAAA ATAACATTAC TTTTTATAAC
ATTGGTTCCG GCAATCAAGG TATAGTTCAT GTGATTGCGC CAGAACTGGG ACTGACACAG
CCGGGAATGA CGATCGCCTG TGGTGATAGC CACACTTCAA GTCATGGGGC GTTTGGGGCG
ATCGCTTTTG GTATTGGTAC TAGCCAAGTG CGGGACGTTC TCGCCTCCCA AACCTTATCC
CTATCCAAAC TCAAAGTCCG TAAAATTGAA GTTAACGGCA CACTCAACCC TGGGGTTTAT
GCCAAAGATG TCATCCTGCA TATCATCCGT ACCCTGGGAG TGAAAGGTGG TGTAGGTTAC
GCCTACGAAT ACGCGGGTAC GACTTTTGAG CAAATGAATA TGGAAGAACG GATGACTGTC
TGCAACATGG CCATTGAGGG TGGCGCTAGA TGCGGTTATG TCAATCCTGA TCAAGTTACC
TATGATTATC TCCAAGGTAG AGACTTTGCC CCCCAAGGCG CTGATTGGGA AAAAGCCGTG
GCTTGGTGGG AATCAATCAA GAGTGATGCT GATGCTGAAT ACGATGATGT AATAGTATTC
AACGCTGCGG ATATTCCCCC CACTGTTACC TGGGGAATTA CCCCCGGTCA AGGTATTGGT
GTGAATCAGT TGATTCCCCA GCCAGAAGAA CTCCTAGAAG AAGACCGCTT TGTAGCTGAA
GAAGCTTACC GTTACATGGA TTTATATCCT GGTCAACCGA TTAAGGGAAC GAAAATTGAC
GTTTGCTTTA TCGGTAGCTG CACTAACGGT AGACTTAGTG ACCTGCAAGA AGCCGCGAAA
ATTGCCAAAG GTCGCCACGT AGCGGAAGGA GTCAAGGCTT TTGTGGTTCC CGGTTCCGAA
CGAGTGAAAA AAGCTGCCGA AGCTGAAGGT TTAGATAAAA TCTTTGAAGC AGCAGGCTTT
GAATGGCGCG AACCTGGATG TTCTATGTGT CTAGCCATGA ACCCCGACAA GCTGGAAGGT
AGACAAATTA GTGCTTCCTC CTCCAACCGC AACTTTAAAG GACGACAAGG ATCAGCTTCC
GGTCGCACTT TGTTAATGAG TCCGGCGATG GTCGCTACTG CGGCGATTCA GGGTGAAGTT
GCGGATGTGC GGGAGTTGTT GTAG
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| Protein sequence | MSKGTLFDKV WDLHTVGTLP SGLTQLFIGL HLVHEVTSPQ AFAMLRERGL KVLFPERTVA
TVDHIVPTEN QARPFVDRLA EEMIQALEQN CQENNITFYN IGSGNQGIVH VIAPELGLTQ
PGMTIACGDS HTSSHGAFGA IAFGIGTSQV RDVLASQTLS LSKLKVRKIE VNGTLNPGVY
AKDVILHIIR TLGVKGGVGY AYEYAGTTFE QMNMEERMTV CNMAIEGGAR CGYVNPDQVT
YDYLQGRDFA PQGADWEKAV AWWESIKSDA DAEYDDVIVF NAADIPPTVT WGITPGQGIG
VNQLIPQPEE LLEEDRFVAE EAYRYMDLYP GQPIKGTKID VCFIGSCTNG RLSDLQEAAK
IAKGRHVAEG VKAFVVPGSE RVKKAAEAEG LDKIFEAAGF EWREPGCSMC LAMNPDKLEG
RQISASSSNR NFKGRQGSAS GRTLLMSPAM VATAAIQGEV ADVRELL
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