Gene Ava_3963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3963 
Symbol 
ID3682560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4910980 
End bp4912257 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content47% 
IMG OID637719315 
ProductS-adenosyl-L-homocysteine hydrolase 
Protein accessionYP_324463 
Protein GI75910167 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0499] S-adenosylhomocysteine hydrolase 
TIGRFAM ID[TIGR00936] adenosylhomocysteinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0128582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00348944 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGCAA CTTCTCCCCG ATTAAAGCAC GAGGTTAAAG ACCTCGCCCT CGCTCCCTTG 
GGAAGACAGC GTATTGAATG GGCTGGACGG GAAATGCCGG TATTGCGGCA AATCCGCGAT
CGCTTTGCCC AAGAAAAACC CTTTGCTGGA CTTCGCCTTG TGGCTTGCGC CCACATCACC
ACAGAAACAG CACATTTGGC GATCGCCTTA AAAGCTGGTG GTGCAGACGC TGTATTGATT
GCTAGTAACC CCCTATCAAC TCAAGATGAC GTAGCTGCTA GCCTCGTCTT AGATCACGAA
ATCCCCGTAT TTGCTCAAAA AGGCGAAGAT AACGCCACCT ACAATCGCCA CGTCCAAATA
GCTTTAGATC ATCGCCCCAA TATCATCATT GATGATGGTA GTGATGTAGT GGCAACTTTG
GTACAAGAAC GCCAACATCA AATCAGCGAT TTGATTGGTA CCACTGAAGA AACCACCACA
GGTATTGTCC GTTTACGCGC CATGTTCAAA GATGGCGTTC TTACCTTCCC CGCCGTCAAT
GTTAACGACG CAGACACCAA GCACTTCTTT GATAACCGCT ATGGTACTGG TCAATCTACC
CTAGACGGGA TTATCCGCGC TACAAATATT TTGTTAGCTG GTAAGAACGT CGTCGTTGTC
GGTTACGGCT GGTGTGGTAA AGGTACAGCC CTGCGCGCCC GTGGTATGGG TGCAAACGTC
ATCGTTACCG AAATCGACCC CATCAAAGCA ATTGAAGCCG TGATGGATGG TTTCCGCGTC
CTGCCAATGG CGGAAGCTGC ACCCCAAGGT GATATCTTTA TCACTGTGAC TGGTAACAAG
CACGTCGTTC GGGGTGAACA CTTTGATGTC ATGAAAGACG GTGCGATCGT TTGTAACTCT
GGTCACTTTG ATTTGGAACT TGATTTAAAA TACTTGGCTG CTAACGCCAA AGAAATCAAG
GAAGTCCGTC CTTTCACCGA AGAATATAAA TTGACAAACG GTAAATCCGT CGTCGTTCTC
GGACAAGGAC GTTTGATTAA TCTAGCTGCG GCTGAAGGAC ACCCAAGCGC AGTTATGGAT
ATGAGTTTTG CTAACCAAGC TTTAGCTTGT GAATACCTAG TGAAGAATAA GGGTAAGTTA
GCTCCTGGTT TACACTCTAT TCCTGTTGAG GTTGATCAAG AAATTGCTCG CTTGAAGTTG
CAAGCAATGG GTATTTACAT CGATACTTTG ACTCCTGAGC AAATTGAGTA CATCAACTCT
TGGACTAGTG GAACTTGA
 
Protein sequence
MTATSPRLKH EVKDLALAPL GRQRIEWAGR EMPVLRQIRD RFAQEKPFAG LRLVACAHIT 
TETAHLAIAL KAGGADAVLI ASNPLSTQDD VAASLVLDHE IPVFAQKGED NATYNRHVQI
ALDHRPNIII DDGSDVVATL VQERQHQISD LIGTTEETTT GIVRLRAMFK DGVLTFPAVN
VNDADTKHFF DNRYGTGQST LDGIIRATNI LLAGKNVVVV GYGWCGKGTA LRARGMGANV
IVTEIDPIKA IEAVMDGFRV LPMAEAAPQG DIFITVTGNK HVVRGEHFDV MKDGAIVCNS
GHFDLELDLK YLAANAKEIK EVRPFTEEYK LTNGKSVVVL GQGRLINLAA AEGHPSAVMD
MSFANQALAC EYLVKNKGKL APGLHSIPVE VDQEIARLKL QAMGIYIDTL TPEQIEYINS
WTSGT