Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3963 |
Symbol | |
ID | 3682560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4910980 |
End bp | 4912257 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637719315 |
Product | S-adenosyl-L-homocysteine hydrolase |
Protein accession | YP_324463 |
Protein GI | 75910167 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0499] S-adenosylhomocysteine hydrolase |
TIGRFAM ID | [TIGR00936] adenosylhomocysteinase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0128582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00348944 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGCAA CTTCTCCCCG ATTAAAGCAC GAGGTTAAAG ACCTCGCCCT CGCTCCCTTG GGAAGACAGC GTATTGAATG GGCTGGACGG GAAATGCCGG TATTGCGGCA AATCCGCGAT CGCTTTGCCC AAGAAAAACC CTTTGCTGGA CTTCGCCTTG TGGCTTGCGC CCACATCACC ACAGAAACAG CACATTTGGC GATCGCCTTA AAAGCTGGTG GTGCAGACGC TGTATTGATT GCTAGTAACC CCCTATCAAC TCAAGATGAC GTAGCTGCTA GCCTCGTCTT AGATCACGAA ATCCCCGTAT TTGCTCAAAA AGGCGAAGAT AACGCCACCT ACAATCGCCA CGTCCAAATA GCTTTAGATC ATCGCCCCAA TATCATCATT GATGATGGTA GTGATGTAGT GGCAACTTTG GTACAAGAAC GCCAACATCA AATCAGCGAT TTGATTGGTA CCACTGAAGA AACCACCACA GGTATTGTCC GTTTACGCGC CATGTTCAAA GATGGCGTTC TTACCTTCCC CGCCGTCAAT GTTAACGACG CAGACACCAA GCACTTCTTT GATAACCGCT ATGGTACTGG TCAATCTACC CTAGACGGGA TTATCCGCGC TACAAATATT TTGTTAGCTG GTAAGAACGT CGTCGTTGTC GGTTACGGCT GGTGTGGTAA AGGTACAGCC CTGCGCGCCC GTGGTATGGG TGCAAACGTC ATCGTTACCG AAATCGACCC CATCAAAGCA ATTGAAGCCG TGATGGATGG TTTCCGCGTC CTGCCAATGG CGGAAGCTGC ACCCCAAGGT GATATCTTTA TCACTGTGAC TGGTAACAAG CACGTCGTTC GGGGTGAACA CTTTGATGTC ATGAAAGACG GTGCGATCGT TTGTAACTCT GGTCACTTTG ATTTGGAACT TGATTTAAAA TACTTGGCTG CTAACGCCAA AGAAATCAAG GAAGTCCGTC CTTTCACCGA AGAATATAAA TTGACAAACG GTAAATCCGT CGTCGTTCTC GGACAAGGAC GTTTGATTAA TCTAGCTGCG GCTGAAGGAC ACCCAAGCGC AGTTATGGAT ATGAGTTTTG CTAACCAAGC TTTAGCTTGT GAATACCTAG TGAAGAATAA GGGTAAGTTA GCTCCTGGTT TACACTCTAT TCCTGTTGAG GTTGATCAAG AAATTGCTCG CTTGAAGTTG CAAGCAATGG GTATTTACAT CGATACTTTG ACTCCTGAGC AAATTGAGTA CATCAACTCT TGGACTAGTG GAACTTGA
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Protein sequence | MTATSPRLKH EVKDLALAPL GRQRIEWAGR EMPVLRQIRD RFAQEKPFAG LRLVACAHIT TETAHLAIAL KAGGADAVLI ASNPLSTQDD VAASLVLDHE IPVFAQKGED NATYNRHVQI ALDHRPNIII DDGSDVVATL VQERQHQISD LIGTTEETTT GIVRLRAMFK DGVLTFPAVN VNDADTKHFF DNRYGTGQST LDGIIRATNI LLAGKNVVVV GYGWCGKGTA LRARGMGANV IVTEIDPIKA IEAVMDGFRV LPMAEAAPQG DIFITVTGNK HVVRGEHFDV MKDGAIVCNS GHFDLELDLK YLAANAKEIK EVRPFTEEYK LTNGKSVVVL GQGRLINLAA AEGHPSAVMD MSFANQALAC EYLVKNKGKL APGLHSIPVE VDQEIARLKL QAMGIYIDTL TPEQIEYINS WTSGT
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