Gene Ava_3944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3944 
Symbol 
ID3682989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4894646 
End bp4895170 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content37% 
IMG OID637719296 
Productankyrin 
Protein accessionYP_324444 
Protein GI75910148 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0207728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGGCA ATGTCCACCA TTATCTTTTC CATGCAAATT CTTCCGAGTT ACAACAAATG 
ATGAACCGTA AAAGTCCTTT CAATTTGAGT GCAGCCACTA AAGAATGGTT GATAGGAAAA
GGCTACAATC CTGAAGATTT AGAACAACCT GGGGAAAATG GCGATACTGC TTTGATGAAA
GCTACACGAG AAGGGATTAA TTCCGTCGTC AAGGAATTAA TTGATTTAGG TGTGGATATC
AATGCTAGAA ACAACGACAA TAATAATGCT TTGTGGTTTG CTTGTTTTGG TAATCATTAT
GATTTAATTC ATCTGCTACT GGCAGCTAGA ATTAACATCG ATAACCAAAA TGATAACGGT
GCTACTGTTT TAATGTATGC CGCATCAGCA GGTAAGACAG CAGTAGTGAA GTTGCTCCTA
CAATATCATC CTAACTTATA TTTAAAAAAT TTGGATGATT TTCAGGCAAT AGATTTTGCC
AGCAATGTAG AAGTTCTAAG GTTACTGAAA AATGCCACAA AGTGA
 
Protein sequence
MVGNVHHYLF HANSSELQQM MNRKSPFNLS AATKEWLIGK GYNPEDLEQP GENGDTALMK 
ATREGINSVV KELIDLGVDI NARNNDNNNA LWFACFGNHY DLIHLLLAAR INIDNQNDNG
ATVLMYAASA GKTAVVKLLL QYHPNLYLKN LDDFQAIDFA SNVEVLRLLK NATK