Gene Ava_3916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3916 
Symbol 
ID3683493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4870039 
End bp4870926 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content47% 
IMG OID637719268 
Productnitrogenase reductase 
Protein accessionYP_324416 
Protein GI75910120 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01287] nitrogenase iron protein 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACG AAAACATTAG ACAGATAGCT TTCTACGGTA AAGGCGGTAT CGGTAAATCT 
ACCACCTCCC AAAACACCCT TGCAGCTATG GCAGAAATGG GTCAACGCAT CATGATCGTA
GGTTGCGACC CTAAAGCTGA CTCCACCCGT TTGATGCTCC ACGCTAAAGC GCAAACCACT
GTACTTCACT TGGCTGCTGA ACGCGGTGCA GTAGAAGACT TAGAACTACA CGAAGTAATG
TTGACCGGTT TCCGTGGCGT TCGTTGCGTA GAATCTGGTG GTCCAGAACC CGGTGTAGGT
TGCGCCGGTC GTGGTATCAT CACCGCCATT AACTTCTTAG AAGAAAACGG TGCTTACCAA
GACCTAGACT TCGTATCCTA CGACGTATTG GGTGACGTTG TATGTGGTGG TTTCGCTATG
CCTATCCGTG AAGGTAAAGC ACAAGAAATC TACATCGTTA CCTCTGGTGA AATGATGGCG
ATGTATGCTG CTAACAACAT CGCTCGCGGT ATTTTGAAAT ATGCTCACTC CGGTGGTGTA
CGCTTGGGTG GTTTGATTTG TAACAGCCGT AAAACTGACC GGGAAGCCGA ATTGATCGAA
AACTTGGCTG AACGTTTGAA CACTCAAATG ATTCACTTCG TACCTCGTGA CAACATCGTT
CAACACGCTG AATTGCGTCG GATGACTGTT AACGAGTACG CACCAGACAG CAACCAAGGT
CAAGAGTACC GTGCATTAGC CAAGAAAATC ATCAACAACG ACAAGCTCAC CATTCCTACA
CCAATTGAAA TGGATGAACT CGAAGCCCTG TTGATCGAAT ACGGTATTCT TGATGATGAT
TCTAAGCACG CAGAAATCAT CGGTAAGCCC GCAGAAGCTA CCAAATAG
 
Protein sequence
MTDENIRQIA FYGKGGIGKS TTSQNTLAAM AEMGQRIMIV GCDPKADSTR LMLHAKAQTT 
VLHLAAERGA VEDLELHEVM LTGFRGVRCV ESGGPEPGVG CAGRGIITAI NFLEENGAYQ
DLDFVSYDVL GDVVCGGFAM PIREGKAQEI YIVTSGEMMA MYAANNIARG ILKYAHSGGV
RLGGLICNSR KTDREAELIE NLAERLNTQM IHFVPRDNIV QHAELRRMTV NEYAPDSNQG
QEYRALAKKI INNDKLTIPT PIEMDELEAL LIEYGILDDD SKHAEIIGKP AEATK