Gene Ava_3910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3910 
Symbol 
ID3683583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4862070 
End bp4862729 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content44% 
IMG OID637719262 
Producthypothetical protein 
Protein accessionYP_324410 
Protein GI75910114 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTGC AAAAGATTTT ACTATCGGTT GTTACAGGTG TTAGTGTTGT GAGCCTGGGA 
TTAGCTGGCT GTACGCCACA ACAAACCGAT TTGGAAGCAC AGACAGAAAC TAATGCACCT
ACTTTAACAG GTCAAACAGA AACTCAAGCA CAAGCTCCAA CAACCCAACC GCAAGAACGT
CCTGCGGATG TGCCTTATGT GCCGACACCA CAGGTTGTGG TAGATGCCAT GTTGCAAGTG
GCACAGGTAG GTAAAAATGA CGTACTTTAC GACTTAGGTA GTGGTGATGG ACGCATTGTC
AATACAGCCG CCCAAAAATT TGGCACACGG GGTACTGGTA TAGATATTAA TCCCGAACGG
ATTCAAGAAG CTAACGAAAA TGCTCAGAAA GCAGGAGTCA GCGATCGCGT AAAATTTGTT
CAGCAAGACT TATTCAAGAC TGATTTTAGT GACGCTACTG TAGTTACCCT CTACCTTCTA
CCCGATATCA ATCTCAAATT GCGTCCTATC CTTCTTAAAC AACTTAAACC CGGTACTCGC
ATTGTCTCCC ACGCTTTTGA TATGGGTGAA TGGAAGCCAG AGAAGACATT ACAAGTAGAT
GGCAGAACTA TCTACTATTG GGTTGTTCCA GAACAAGTCC CAGCTAATTT ACGCCAGTAA
 
Protein sequence
MKLQKILLSV VTGVSVVSLG LAGCTPQQTD LEAQTETNAP TLTGQTETQA QAPTTQPQER 
PADVPYVPTP QVVVDAMLQV AQVGKNDVLY DLGSGDGRIV NTAAQKFGTR GTGIDINPER
IQEANENAQK AGVSDRVKFV QQDLFKTDFS DATVVTLYLL PDINLKLRPI LLKQLKPGTR
IVSHAFDMGE WKPEKTLQVD GRTIYYWVVP EQVPANLRQ