| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3908 |
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| Symbol | |
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| ID | 3683581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 4859733 |
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| End bp | 4860893 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637719260 |
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| Product | periplasmic ligand-binding sensor protein |
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| Protein accession | YP_324408 |
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| Protein GI | 75910112 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3292] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGGAG GTGCTGTCTC TAAAGGAAAT GTCATCGTGG GATTATTTCG CAAGCGTATT
AGTTTACTGA TTACTTCTAT ATTGTTGGGG TCGATAAGTC TGCCGAGTAT GAACGTTGTT
GGTATTGGTA GTTTGGCGAG GGCAGAAAAA GCTGCGACTA ATGCACCATC ACCAACAACT
CCTGATATTA AACCATCCGA ATTAAAGCCG GCTTATCCTC CATCTGCACC ACCCCCACGG
GTAGACCCCT TGCCTGATGA ACGGGATATA CAGGAACGCG CAGTAGAAAT TGATTATCGC
GTGAGTAACT TATTAGGAGA TTTCGCTGGT AATCTCTGGG TGGGTTCTTG GCGGGGATTA
TCGCGGATTG ACCCGAAAAC AGGTAAGATT TTAGCCCGTG TTAGTTTACC CAATGTTGCC
ATTGGTGCTT TAGCACAAGA TAAAGTCGGT CGTTTGTGGG TGGGAACTTA TGAAGGACTG
ATGAGAGTAG AACCCCGCAC TAATGAAATT TCAGCGCAGA ATTTGTTTTT GCCTTCCAAG
CGGGTGTTAT CACTGTTAAC TGATAAGCGG GGTTATCTGT GGGTGGGAAC TGACAATGGT
TTAGCCTTAG TTAGTCCTGA CCAAGGTTTA ATTATGACGA CCGTCAAAAA TTTGCCTGGT
GTGAGTGGCA ACACCTTAAC TTTAGATGCT GATGGTCAAC TCTGGGCGGG AACTCTAGAT
GGAGTTGTGA GGATTAATAC AGCCAGTGCT TTGATTATGA AGCGAATCAA CGATTTACCT
GGTACTACAG TGCAAGCCTT AGCTATTAGT CCAGAAGGTT TAATTTGGGC AGGAATGCCG
AATAATTTGC TGGTAATTAA CCCGAAAACT GGCATAGTAC TGAGGTCTGT GGCTCGCTTG
CGGGGTAAAA ACGTGACAGC CGTGCGCTTT GCTAAAGATG GTAGTGTTTG GGTAGGTACT
CACAATGGTT TGCTACGGTT AAATCCCAAT ACAGGTGCTG TACTAGATGA AGTTGCCGGA
CTTCCTTCTA GTCGAGTTTT GTCCCTTGTG CCTGATGTCG CCAACAAATT ATGGATTGGT
ACTAGTGAAG GTCTGGCTTG GTTAATGCCC AAAATGGACA AAGCAACAGC TCATTTGGCT
TTTAGTCGCC TTGTGAAATG A
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| Protein sequence | MTGGAVSKGN VIVGLFRKRI SLLITSILLG SISLPSMNVV GIGSLARAEK AATNAPSPTT
PDIKPSELKP AYPPSAPPPR VDPLPDERDI QERAVEIDYR VSNLLGDFAG NLWVGSWRGL
SRIDPKTGKI LARVSLPNVA IGALAQDKVG RLWVGTYEGL MRVEPRTNEI SAQNLFLPSK
RVLSLLTDKR GYLWVGTDNG LALVSPDQGL IMTTVKNLPG VSGNTLTLDA DGQLWAGTLD
GVVRINTASA LIMKRINDLP GTTVQALAIS PEGLIWAGMP NNLLVINPKT GIVLRSVARL
RGKNVTAVRF AKDGSVWVGT HNGLLRLNPN TGAVLDEVAG LPSSRVLSLV PDVANKLWIG
TSEGLAWLMP KMDKATAHLA FSRLVK
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