Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3907 |
Symbol | rbcL |
ID | 3683580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4857469 |
End bp | 4858899 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637719259 |
Product | ribulose bisophosphate carboxylase |
Protein accession | YP_324407 |
Protein GI | 75910111 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTTACG CTCAAACGAA GACTCAGACA AAATCTGGGT ATAAAGCCGG GGTTCAAGAT TACAGACTAA CTTATTACAC ACCTGATTAC ACACCTAAAG ATACAGATAT TCTGGCGGCG TTCCGTGTTA CACCCCAGCC CGGAGTTCCC TTTGAGGAAG CGGCTGCGGC TGTAGCGGCT GAGTCTTCTA CTGGTACTTG GACGACCGTA TGGACAGACC TGTTAACCGA TCTAGATCGT TACAAAGGTC GTTGCTACGA TATCGAACCA GTACCTGGCG AAGACAACCA ATTCATTGCC TACATCGCTT ATCCTTTGGA TCTGTTTGAA GAAGGCTCCA TCACCAACGT TTTAACCTCA ATTGTAGGTA ACGTATTTGG TTTTAAAGCA TTACGCGCAT TGCGTTTGGA AGACATTCGC TTTCCTGTTG CTTACATCAA AACTTTCCAA GGCCCTCCTC ACGGTATCCA AGTTGAGCGT GACAAATTAA ACAAATATGG TCGTCCTTTG TTGGGTTGTA CCATCAAACC AAAATTAGGT CTGTCTGCTA AGAACTACGG ACGCGCTGTA TACGAGTGTT TGCGCGGTGG TTTGGACTTC ACCAAAGACG ACGAAAACAT CAACTCTGCA CCATTCCAAA GATGGCGCGA TCGCTTCCTG TTTGTGTCTG ATGCTATCAG CAAAGCACAA GCAGAAACAG GCGAAATCAA AGGTCACTAC CTCAACGTGA CAGCTCCTAC CTGTGAAGAA ATGTTGAAGC GGGCTGAGTA CGCTAAAGAA CTCAATCAGC CCATCATCAT GCACGACTAC CTAACAGCAG GTTTCACCGC TAACACCACC TTGGCTCGTT GGTGTCGTGA CAACGGCGTT CTACTGCACA TCCACCGCGC GATGCACGCA GTAATCGACC GTCAAAAGAA CCACGGTATC CACTTCCGTG TATTAGCTAA AGCCCTACGT CTATCTGGTG GTGACCACAT CCACACCGGT ACCGTAGTAG GTAAATTGGA AGGTGAACGC GGTATCACAA TGGGCTTCGT TGACCTATTG CGTGAAAACT ACGTTGAACA AGACAAGTCT CGCGGTATCT ACTTTACCCA AGACTGGGCT TCTTTACCTG GTGTAATGGC AGTTGCTTCC GGTGGTATCC ACGTATGGCA TATGCCCGCA TTGGTAGAAA TCTTCGGTGA TGACTCCGTA CTGCAATTTG GTGGTGGTAC ACTCGGACAC CCCTGGGGTA ACGCTCCTGG TGCAACCGCT AACCGTGTAG CTTTGGAAGC TTGCGTCCAA GCGCGTAACG AAGGTCGTAA CTTGGCTCGT GAAGGTAACG ACGTTATCCG TGAAGCTGCT AAGTGGTCTC CTGAATTGGC TGTCGCTTGC GAACTGTGGA AAGAAATCAA GTTCGAGTTT GAGGCAATGG ATACCGTCTG A
|
Protein sequence | MSYAQTKTQT KSGYKAGVQD YRLTYYTPDY TPKDTDILAA FRVTPQPGVP FEEAAAAVAA ESSTGTWTTV WTDLLTDLDR YKGRCYDIEP VPGEDNQFIA YIAYPLDLFE EGSITNVLTS IVGNVFGFKA LRALRLEDIR FPVAYIKTFQ GPPHGIQVER DKLNKYGRPL LGCTIKPKLG LSAKNYGRAV YECLRGGLDF TKDDENINSA PFQRWRDRFL FVSDAISKAQ AETGEIKGHY LNVTAPTCEE MLKRAEYAKE LNQPIIMHDY LTAGFTANTT LARWCRDNGV LLHIHRAMHA VIDRQKNHGI HFRVLAKALR LSGGDHIHTG TVVGKLEGER GITMGFVDLL RENYVEQDKS RGIYFTQDWA SLPGVMAVAS GGIHVWHMPA LVEIFGDDSV LQFGGGTLGH PWGNAPGATA NRVALEACVQ ARNEGRNLAR EGNDVIREAA KWSPELAVAC ELWKEIKFEF EAMDTV
|
| |