Gene Ava_3907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3907 
SymbolrbcL 
ID3683580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4857469 
End bp4858899 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content48% 
IMG OID637719259 
Productribulose bisophosphate carboxylase 
Protein accessionYP_324407 
Protein GI75910111 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTACG CTCAAACGAA GACTCAGACA AAATCTGGGT ATAAAGCCGG GGTTCAAGAT 
TACAGACTAA CTTATTACAC ACCTGATTAC ACACCTAAAG ATACAGATAT TCTGGCGGCG
TTCCGTGTTA CACCCCAGCC CGGAGTTCCC TTTGAGGAAG CGGCTGCGGC TGTAGCGGCT
GAGTCTTCTA CTGGTACTTG GACGACCGTA TGGACAGACC TGTTAACCGA TCTAGATCGT
TACAAAGGTC GTTGCTACGA TATCGAACCA GTACCTGGCG AAGACAACCA ATTCATTGCC
TACATCGCTT ATCCTTTGGA TCTGTTTGAA GAAGGCTCCA TCACCAACGT TTTAACCTCA
ATTGTAGGTA ACGTATTTGG TTTTAAAGCA TTACGCGCAT TGCGTTTGGA AGACATTCGC
TTTCCTGTTG CTTACATCAA AACTTTCCAA GGCCCTCCTC ACGGTATCCA AGTTGAGCGT
GACAAATTAA ACAAATATGG TCGTCCTTTG TTGGGTTGTA CCATCAAACC AAAATTAGGT
CTGTCTGCTA AGAACTACGG ACGCGCTGTA TACGAGTGTT TGCGCGGTGG TTTGGACTTC
ACCAAAGACG ACGAAAACAT CAACTCTGCA CCATTCCAAA GATGGCGCGA TCGCTTCCTG
TTTGTGTCTG ATGCTATCAG CAAAGCACAA GCAGAAACAG GCGAAATCAA AGGTCACTAC
CTCAACGTGA CAGCTCCTAC CTGTGAAGAA ATGTTGAAGC GGGCTGAGTA CGCTAAAGAA
CTCAATCAGC CCATCATCAT GCACGACTAC CTAACAGCAG GTTTCACCGC TAACACCACC
TTGGCTCGTT GGTGTCGTGA CAACGGCGTT CTACTGCACA TCCACCGCGC GATGCACGCA
GTAATCGACC GTCAAAAGAA CCACGGTATC CACTTCCGTG TATTAGCTAA AGCCCTACGT
CTATCTGGTG GTGACCACAT CCACACCGGT ACCGTAGTAG GTAAATTGGA AGGTGAACGC
GGTATCACAA TGGGCTTCGT TGACCTATTG CGTGAAAACT ACGTTGAACA AGACAAGTCT
CGCGGTATCT ACTTTACCCA AGACTGGGCT TCTTTACCTG GTGTAATGGC AGTTGCTTCC
GGTGGTATCC ACGTATGGCA TATGCCCGCA TTGGTAGAAA TCTTCGGTGA TGACTCCGTA
CTGCAATTTG GTGGTGGTAC ACTCGGACAC CCCTGGGGTA ACGCTCCTGG TGCAACCGCT
AACCGTGTAG CTTTGGAAGC TTGCGTCCAA GCGCGTAACG AAGGTCGTAA CTTGGCTCGT
GAAGGTAACG ACGTTATCCG TGAAGCTGCT AAGTGGTCTC CTGAATTGGC TGTCGCTTGC
GAACTGTGGA AAGAAATCAA GTTCGAGTTT GAGGCAATGG ATACCGTCTG A
 
Protein sequence
MSYAQTKTQT KSGYKAGVQD YRLTYYTPDY TPKDTDILAA FRVTPQPGVP FEEAAAAVAA 
ESSTGTWTTV WTDLLTDLDR YKGRCYDIEP VPGEDNQFIA YIAYPLDLFE EGSITNVLTS
IVGNVFGFKA LRALRLEDIR FPVAYIKTFQ GPPHGIQVER DKLNKYGRPL LGCTIKPKLG
LSAKNYGRAV YECLRGGLDF TKDDENINSA PFQRWRDRFL FVSDAISKAQ AETGEIKGHY
LNVTAPTCEE MLKRAEYAKE LNQPIIMHDY LTAGFTANTT LARWCRDNGV LLHIHRAMHA
VIDRQKNHGI HFRVLAKALR LSGGDHIHTG TVVGKLEGER GITMGFVDLL RENYVEQDKS
RGIYFTQDWA SLPGVMAVAS GGIHVWHMPA LVEIFGDDSV LQFGGGTLGH PWGNAPGATA
NRVALEACVQ ARNEGRNLAR EGNDVIREAA KWSPELAVAC ELWKEIKFEF EAMDTV