Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3904 |
Symbol | |
ID | 3683577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 4855671 |
End bp | 4856321 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637719256 |
Product | lipolytic protein |
Protein accession | YP_324404 |
Protein GI | 75910108 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCACA GTTTACCCAC AGGAGATATA GTGACGAAAC AATCTAAACC TCAAATCAGA ATTTGTTTTG TTGGCGACTC TTTCGTTAAT GGTACTGGTG ACCCTGAGTA TCTTGGTTGG ACAGGTAGAG TATGCGTTAA TGCTAATAAA AAAGGTTACG ATATTACCTA CTATAATTTA GGTATTAGGC GAGATACCAG CAGTGATATA GCCAAGCGTT GGTTACAAGA AGTATCGCTA CGATTACCGA AGGAATATGA TGGAAGAGTT GTATTCTCTT TTGGATTAAA CGATACAACT CTAGAAAATG GTAAACCTCG TGTGAGTATT GCTGAATCTA TCAAAAATAC ACGAGAAATT TTAACTCAAG CGAAAAAGTT ATATCCTGTT TTAATGATTA GTCCAGCACC ATATATAGAA CAGCAAGACC CAGGAAGAAG ACGAAGAACT ATTGATTTAT CTCAACAGCT AGCTTTAGTT TGTCAAGATT TGGATGTGCC TTATTTAGAT GTTTTTCCAT TATTAGAAAA ACCAAGTGTT TGGCTACATG AAGCTAAGGC TAATGATGGT GTGCATCCCC AAGCTGGAGG TTATGGAGAA TTTGCCAGAA TTGTAGAGAA TTGGGACGCT TGGTTAAATT GGTTTAGATA A
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Protein sequence | MHHSLPTGDI VTKQSKPQIR ICFVGDSFVN GTGDPEYLGW TGRVCVNANK KGYDITYYNL GIRRDTSSDI AKRWLQEVSL RLPKEYDGRV VFSFGLNDTT LENGKPRVSI AESIKNTREI LTQAKKLYPV LMISPAPYIE QQDPGRRRRT IDLSQQLALV CQDLDVPYLD VFPLLEKPSV WLHEAKANDG VHPQAGGYGE FARIVENWDA WLNWFR
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