Gene Ava_3904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3904 
Symbol 
ID3683577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4855671 
End bp4856321 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content37% 
IMG OID637719256 
Productlipolytic protein 
Protein accessionYP_324404 
Protein GI75910108 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCACA GTTTACCCAC AGGAGATATA GTGACGAAAC AATCTAAACC TCAAATCAGA 
ATTTGTTTTG TTGGCGACTC TTTCGTTAAT GGTACTGGTG ACCCTGAGTA TCTTGGTTGG
ACAGGTAGAG TATGCGTTAA TGCTAATAAA AAAGGTTACG ATATTACCTA CTATAATTTA
GGTATTAGGC GAGATACCAG CAGTGATATA GCCAAGCGTT GGTTACAAGA AGTATCGCTA
CGATTACCGA AGGAATATGA TGGAAGAGTT GTATTCTCTT TTGGATTAAA CGATACAACT
CTAGAAAATG GTAAACCTCG TGTGAGTATT GCTGAATCTA TCAAAAATAC ACGAGAAATT
TTAACTCAAG CGAAAAAGTT ATATCCTGTT TTAATGATTA GTCCAGCACC ATATATAGAA
CAGCAAGACC CAGGAAGAAG ACGAAGAACT ATTGATTTAT CTCAACAGCT AGCTTTAGTT
TGTCAAGATT TGGATGTGCC TTATTTAGAT GTTTTTCCAT TATTAGAAAA ACCAAGTGTT
TGGCTACATG AAGCTAAGGC TAATGATGGT GTGCATCCCC AAGCTGGAGG TTATGGAGAA
TTTGCCAGAA TTGTAGAGAA TTGGGACGCT TGGTTAAATT GGTTTAGATA A
 
Protein sequence
MHHSLPTGDI VTKQSKPQIR ICFVGDSFVN GTGDPEYLGW TGRVCVNANK KGYDITYYNL 
GIRRDTSSDI AKRWLQEVSL RLPKEYDGRV VFSFGLNDTT LENGKPRVSI AESIKNTREI
LTQAKKLYPV LMISPAPYIE QQDPGRRRRT IDLSQQLALV CQDLDVPYLD VFPLLEKPSV
WLHEAKANDG VHPQAGGYGE FARIVENWDA WLNWFR