Gene Ava_3892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3892 
Symbol 
ID3683565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4845570 
End bp4846271 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content45% 
IMG OID637719244 
Producthypothetical protein 
Protein accessionYP_324392 
Protein GI75910096 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGGAA GATTTACTTT AAACCAGTCA GCAGAAGCAT TAGCTGAGTT TTTTCATATC 
CAGCCACTCC TGGATTTAGA GGCTCAATAT AACATTGCAC CTACGCAAAC CGTGGTGACA
GTTTTACACA ACCCTGAAAG TAATAAACGT GAATTTCAAC GGTTACGCTG GGGTTTGATA
CCTTCATGGG CTAAAGATCC AGCGATCGCC TCGAAGCTCA TCAACGCCAG AGCCGAAACT
GTTGCCGAAA AACCCTCTTT TCGTTCAGCA TTCAAGCAGC GACGCTGTTT AGTAGTAGCT
GATGGTTTTT TTGAATGGCA AAGACAGCAA GGTAAAAAAC AACCCTTTTA TTTCCGCCTC
CAAGACAGTC AACCCTTTGG CTTTGCAGGA TTATGGGAAA AATGGCAAAC ACCGGCTGGT
GAAGAAATCA CCTCTTGTAC AATCGTCACA ACAGCAGCCA ACGAACTGCT GCAACCAATT
CATGACCGAA TGCCGGTCAT CCTCGCTCCC CAAGATTACG ATTTGTGGTT AGATCCCCAA
GAGCAAAGGC CCCAAGCATT ACAACACTTA TTATCTCCCT ATCCAGCCTC AGAAATGACC
GCCTACCCAG TTAGTACCTT AGTCAATAGC CCAAAACACA ACAACCCAGA ATGTATTATC
CCCATCCCAG GGCAGAATAG TTCCCCAAAT CAGTTAAATT AG
 
Protein sequence
MCGRFTLNQS AEALAEFFHI QPLLDLEAQY NIAPTQTVVT VLHNPESNKR EFQRLRWGLI 
PSWAKDPAIA SKLINARAET VAEKPSFRSA FKQRRCLVVA DGFFEWQRQQ GKKQPFYFRL
QDSQPFGFAG LWEKWQTPAG EEITSCTIVT TAANELLQPI HDRMPVILAP QDYDLWLDPQ
EQRPQALQHL LSPYPASEMT AYPVSTLVNS PKHNNPECII PIPGQNSSPN QLN