| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3882 |
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| Symbol | |
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| ID | 3683613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 4836452 |
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| End bp | 4837093 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637719234 |
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| Product | SSU ribosomal protein S30P / sigma 54 modulation protein |
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| Protein accession | YP_324382 |
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| Protein GI | 75910086 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.907469 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCTTG TCATCCACGG CAAAAATATA GAAATTACCG ATGCGATTCG AGAATATGTG
CATCAGAAAA TTGAAAAGGC GGTTAATCAC TTTCAGAACA TCACCAATGA AGTGGATGTC
CATTTAAGCG TGGCTCGCAA TCCCCGAATT AATACCAGAC AAGCAGCTGA AGTTACCATC
TATGCAAATG GTAGCGTCAT CCGCGCGGAG GAAAGCAGCG AAAATTTATA CGCAAGCATT
GATTTAGTAG CAGACAAGAT TTCCCGACAA CTGCGTAAAT ATAAAGAAAG AAAACAAGAC
CAGAAAACAC AAGCTCTACC AACTACCGAA ACCATCGTAC CAGAAACAGT AGTTGCAGAT
TTAATAGGCG ATCGCACTCC CGAACTCCCC GAAGAAGTCG TCCGCACCAA ATACTTTTCC
ATGCCCCCCA TGACCGTTAC CGAAGCCTTA GAGCAGTTGC AACTAGTGGG GCATGACTTT
TATATGTTCC ATAACGCCGA AACAGGAGAA ATTAACGTTA TTTATGAACG CAACCACGGC
GGCTATGGTG TGATTCAACC CCGAAATAAT AACGGACACA CCAACGGAAA AAATGGTAAA
ACTCATCATG TCGTGATGGC GGAAAAGTCT CATAGTAGGT AA
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| Protein sequence | MKLVIHGKNI EITDAIREYV HQKIEKAVNH FQNITNEVDV HLSVARNPRI NTRQAAEVTI
YANGSVIRAE ESSENLYASI DLVADKISRQ LRKYKERKQD QKTQALPTTE TIVPETVVAD
LIGDRTPELP EEVVRTKYFS MPPMTVTEAL EQLQLVGHDF YMFHNAETGE INVIYERNHG
GYGVIQPRNN NGHTNGKNGK THHVVMAEKS HSR
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