Gene Ava_3879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3879 
Symbol 
ID3683610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4833844 
End bp4834812 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content42% 
IMG OID637719231 
Producthypothetical protein 
Protein accessionYP_324379 
Protein GI75910083 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.612459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.706201 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAA CTACCAACCA GCTAGACGAT TTCGCCATCA CACTACCAAT TACTCAAGCA 
GCTCGTATTG CTGCCCAGCA GTTCGCCAAC AGACAGCCTA ATTCCCGAAA AGCCGAGCAA
GTTAGGCTCA ATACTTTGGC TGTGTCAGTG GTGAATGATT ATTTGCAAAT GATGGAAGTT
GCAACTAATT TGACAGCTAG TGACAGTTGG AACCCATTAA TGCAGCTATG TGGAGATGTA
GCTGATCTAG AAGTTCCTTC AGTTGGTCGT TTAGAATGCC GTCCTGTTCA GCTGCATGAG
CAAGTATGTT CTGTTCCCCC AGAAACTTGG GAAGAAAGAA TTGGTTATGT AATTGTACAA
GTTGATGAAA CTAATACAGA AGCTAAATTA ATAGGTTTTA CTAAAAAAGT TAATCAAGAA
ACATTACCTC TAAATCAACT ACAACCTATA GAAGCATTGA TCGATCGCCT AGAACAACTC
AAAACTTCTC CTGTGGATGC TTTGGTGAAT TTGAGTCAGT GGTTTGTCGG GCAATTTGAA
TCTGGCTGGC AAACAGTAGA AACTTTGTGG AATTCCCTGG AAGCTAGACC TGCTTATGGC
TTTCGTAGCC CTGTAAGCAC TCCAGATACA ACTTTGAGTC AAGCAGAAGC CGTTACCAGA
CGAGCAAAAC TCATTGACTT GGGGATCAAA ATAGTTGACC AACCAGTAAT GTTGATTGTG
GAAATTGCAC CTGAAGCAAA CGGACAAATC GGTGTCCGTT TGCAACTACA CTCCACAGGT
AATCAAATAC ATCTACCCAC AGGAGTAAAA CTGACAGTAA TAGACACTTC CGGCGCAGTA
TTTCTAGAAG CTCAAGCCAG GAGTGCTGAC AACTACCTAC AACTACAATT TCGTGGGGAA
ATTCAGGAAC AGTTCAGCGT TCAGGTCGCA TTAGATGATA TGAGTATTAC AGAGAGCTTT
GTAATTTAA
 
Protein sequence
MTKTTNQLDD FAITLPITQA ARIAAQQFAN RQPNSRKAEQ VRLNTLAVSV VNDYLQMMEV 
ATNLTASDSW NPLMQLCGDV ADLEVPSVGR LECRPVQLHE QVCSVPPETW EERIGYVIVQ
VDETNTEAKL IGFTKKVNQE TLPLNQLQPI EALIDRLEQL KTSPVDALVN LSQWFVGQFE
SGWQTVETLW NSLEARPAYG FRSPVSTPDT TLSQAEAVTR RAKLIDLGIK IVDQPVMLIV
EIAPEANGQI GVRLQLHSTG NQIHLPTGVK LTVIDTSGAV FLEAQARSAD NYLQLQFRGE
IQEQFSVQVA LDDMSITESF VI