| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3878 |
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| Symbol | |
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| ID | 3683609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 4831331 |
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| End bp | 4833679 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637719230 |
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| Product | sensor protein |
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| Protein accession | YP_324378 |
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| Protein GI | 75910082 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4252] Predicted transmembrane sensor domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00432264 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGT TAGTAGTACT GAAATTTGGA GATGGTAGTT TTGAGCAGGG GTTTACCGTA
ACTCTTCAGA TTGGTGAAGA AAGCGATCGC CCATCGACGG AAATCACAGG TAAACTCCCA
CCATGTCCCG AAATATTACT TTACTACTCT CGTTGGCAGT CCACCTATCT ACAGCTTGGT
AATGGTTATC GTCTAGATGC TGACAAAATC CAAGTTACAA ATGTGTCAGT AACTCAAGAT
TGTCATGAGT TAGCTTTAAT TGTCCGCGCT CGCTTTAATA CTTGGCTACA AGCACAAGAA
TTTCGACCCT TACGGGAAAA ATGGCTGGAG AAATTACAGC CCACCGATGA AATCAGAGTA
ATTTTACAAT CAGAAAATAG CTACTTACAA AGATTACCTT GGCATATCTG GGATTTACTG
GAACGCTATC CCAAGGCAGA AATCGCCCTC TCTTCACCAA GCTATGAGCT AATTCATAAA
CGCAGAACTT CCAGTCCAAC TGTGAATATT TTGGCGATTG TCGGTAATAG TCAGGGCATT
GATACCCACG CAGACCAAGC AATGCTGCAA AATTGTCCCA ATGCGGACGT TAGCTTTTTA
GTAGAACCAC AACGCAAAGA ATTAACAGAT CATTTGTGGG GAAAAAGCTG GGATATTTTA
TTTTTCGCTG GACACAGTTC TAGTCAAGGA GATGATGGGA TTGGGCGAAT CTACCTCAAC
CAGACTGATA GCCTCAGCAT TAGTGAATTA AAATATGCCT TGAAACAAGC GATAGCAAGG
GGTTTACAAC TAGCAATTTT CAACTCTCGT GATGGATTGG GACTGGCGAA AGAACTAGCT
GATTTAAACA TTCCCCAGAT CATTGTCATG CGCGAACCTG TTCCCGATCA GGTAGCCCAA
GAGTTTTTAA AATATTTTCT CCTCAGCTTT GCTAATGGTG AATCTTTATA CCAAGCAGTC
CGGCACGCAC GGGAGCGATT GCAAGGATTA GAAGATAGAT TTCCCTGTGC AACTTGGCTA
CCAGTAATTT GTCAAAATCC TGCTCAAAAG CCACTGACTT GGGAGGAACT CACAGAACCA
CCAACCCAAC CAATATTTAA TGATGTCCCA CCAGTCTCTA AAAAACGCGG ATTAAAAAGG
ACTGTATTTT CGAGTTTGCT AGTGACCGCC GCAGTTTATG GATTAAGGTT TTTGGGCGCT
TTACAAACTG GGGAACTGCA AGCATTTGAT CAGATGATGC GATCGCGCCC CGACGAAGGC
CCCGATCCCA GGATATTAAT CGTCACCATT GACGATGAAG ATTTAGCTCA TCAGCGACGT
AACAACGAGT ACCTAAAAGG TACATCTATA TCAGAGAAAT CACTTAATTT ACTCCTAGCA
AAAATATCCC AGTATCAACC AAAAGCTATT GGCTTAGATA TTTATCGTGA TTTCCATGCC
GAACAACCAG AGTTAATCTC TCGACTACGA CAAACTGAGA ATTTAATTGG TATATGCAAA
GGAAGTGATA CCAGCGAAAA TATCAAAGGC ATTGAATCAC CACCAGAAAT TCCGCAAGAA
CGCCTGGGAT TTAGTGACTT TGTTCACGAT GATGATGGTG TAGTACGGCG ACATCTCCTG
TTTATGAGTC AGGAAACAGC CTCATTATGT TCTGCGTCCT ATGCTTTCAG TTCTCAATTG
GCATTCCGCT ATCTATCCTC CTTAGGCATT CAAGCAAAAT TTACCTCTGG ACAATTCACC
AAAAATTTAA AGTTGGGTGA TACCGTACTG CATCGCCTTT CGTCTCGCAT GGGAGCCTAT
CAAAATATTG ATGCCAATGG TGGTCAAATC TTACTAAACT ATCGCGCCGC CAAGAAAATC
GCCGAACAGG TGACACTTAC CCAACTTTTA TCTAGTCCTA TCAATCCCAA CGCCATTAAA
GACCGGATTA TACTCATTGG CGTGGTAGCC AAAGGCGACT TTCCCGACTA TTGGGCTACA
CCATACGGCC ATCTTCTAGA TGAGCAAATG CCCGGAGTCA TGGTACAAGC TCACATGGTT
AGCCAGATTA TTAGTGCTGT TTTAGATGGA CGCTCTCTGT TGAGGGTTTG GTTGCCTGGG
TTAGAAATAA TCTGGATTGG AATTTGGGCT GGATTAGGAG GATTCCTAGC TTGGAGATGG
CGTTTGCTCC CTCATTTAGC ATTAGCAGTT GGTATTAGTT CTAGCGTTTT GTACTTATTA
TGTCTGAGCC TGCTAGTTTG GGGCTTTTGG GTTCCCTTTG TCCCATCAGC TTTATCTCTG
GTATCAACTG TTACGGTAGT TACAATTCAA AATTCCAAGT TTCTAGAGGA AGAGGGGGGT
AGGGAGTAG
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| Protein sequence | MAKLVVLKFG DGSFEQGFTV TLQIGEESDR PSTEITGKLP PCPEILLYYS RWQSTYLQLG
NGYRLDADKI QVTNVSVTQD CHELALIVRA RFNTWLQAQE FRPLREKWLE KLQPTDEIRV
ILQSENSYLQ RLPWHIWDLL ERYPKAEIAL SSPSYELIHK RRTSSPTVNI LAIVGNSQGI
DTHADQAMLQ NCPNADVSFL VEPQRKELTD HLWGKSWDIL FFAGHSSSQG DDGIGRIYLN
QTDSLSISEL KYALKQAIAR GLQLAIFNSR DGLGLAKELA DLNIPQIIVM REPVPDQVAQ
EFLKYFLLSF ANGESLYQAV RHARERLQGL EDRFPCATWL PVICQNPAQK PLTWEELTEP
PTQPIFNDVP PVSKKRGLKR TVFSSLLVTA AVYGLRFLGA LQTGELQAFD QMMRSRPDEG
PDPRILIVTI DDEDLAHQRR NNEYLKGTSI SEKSLNLLLA KISQYQPKAI GLDIYRDFHA
EQPELISRLR QTENLIGICK GSDTSENIKG IESPPEIPQE RLGFSDFVHD DDGVVRRHLL
FMSQETASLC SASYAFSSQL AFRYLSSLGI QAKFTSGQFT KNLKLGDTVL HRLSSRMGAY
QNIDANGGQI LLNYRAAKKI AEQVTLTQLL SSPINPNAIK DRIILIGVVA KGDFPDYWAT
PYGHLLDEQM PGVMVQAHMV SQIISAVLDG RSLLRVWLPG LEIIWIGIWA GLGGFLAWRW
RLLPHLALAV GISSSVLYLL CLSLLVWGFW VPFVPSALSL VSTVTVVTIQ NSKFLEEEGG
RE
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