| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3869 |
|---|
| Symbol | |
|---|
| ID | 3678509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 4823842 |
|---|
| End bp | 4824756 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637719221 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_324369 |
|---|
| Protein GI | 75910073 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTCGG AAGAGAAAAT CTTAAGTGTT GATTTTACTC AAGAAGATGC CTATACAGAA
ATTCTACCGC GATCGCCCCT GGTTTCTAGT TATCATGCCC AATGGCAAGG TCTACGGTTA
GATGTTCACC AACAGCCCGG TCATGAAACT CCAGAACACA GCCCACAGCA ACACGTTCTC
ACTGTTAGTT TAGAGCAGCA AATAGTCCGT TCAGAGCGCA TACTTGATGG GCGTTTGCAG
TACGAGAATA TAGCTAAGGG CGATGTGGCA ATCATTCCTG CCCAAACTCG TCACATATCA
CGCTGGCAAT CAGAAGCAAA ATTTCTCGTC CTCAGCATGG AACCAGCTTT TTTTACACGT
ATGGTAATAG AAGCTGGAGA TTTACAGAAA ATTGAAATAA AACCTCGTTT TGCTGCACCA
GATCCTTTAA TTCAACAAAT TGGGCTAGCA CTCCAAACAG AACTAGAATC TGAGCATAAA
GGAAGTAGCA TTTACATTGA ATCTCTGACG ACCACGCTTT GTATTCACCT ACTCAAACAC
TATTGTGTAA CAGGTGGAAC CATCCTTGAC GACCATCATC ATAAAGGACT TTCACATTGG
AAACTCAGAC AAGCAATTTC CTACATTCAT GAAAATCTTG ATCAAGATTT GACTTTGGTT
GATATTTCCA CAGCAGTAGG AATGAGTATG TATTATTTTT CGCGCCAATT TAAGCAATCA
ACTGGTTTTG CACCACATCA ATATGTCATG AATTGCCGAA TTGAACGCGC AAAAAAGTTA
CTGGGTAGCA CTAACAAAAC CATAGAGCAA ATATGTACCC AAGTCGGCTT TCAAAGCCAA
AGCCACTTCA CAAATGTATT TCGTAAACTC ATGGGTATTA CACCCAGGGT ATACAGGGAA
CAAGTCAAGA CTTAA
|
|---|
| Protein sequence | MMSEEKILSV DFTQEDAYTE ILPRSPLVSS YHAQWQGLRL DVHQQPGHET PEHSPQQHVL
TVSLEQQIVR SERILDGRLQ YENIAKGDVA IIPAQTRHIS RWQSEAKFLV LSMEPAFFTR
MVIEAGDLQK IEIKPRFAAP DPLIQQIGLA LQTELESEHK GSSIYIESLT TTLCIHLLKH
YCVTGGTILD DHHHKGLSHW KLRQAISYIH ENLDQDLTLV DISTAVGMSM YYFSRQFKQS
TGFAPHQYVM NCRIERAKKL LGSTNKTIEQ ICTQVGFQSQ SHFTNVFRKL MGITPRVYRE
QVKT
|
|---|
| |